Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm19326-201ENSMUST00000219818 326 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 AC116589.9-201ENSMUST00000221462 908 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm22229-201ENSMUST00000082987 108 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm650-201ENSMUST00000144428 1551 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm26154-201ENSMUST00000102339 96 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Mir1195-201ENSMUST00000116818 98 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm13804-201ENSMUST00000119552 172 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm12006-201ENSMUST00000120786 403 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm22947-201ENSMUST00000158559 91 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Mir3076-201ENSMUST00000175415 60 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.33□□□□□ -2.04
Trim3Q9R1R2 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Mir3069-201ENSMUST00000198802 65 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm42164-201ENSMUST00000198881 379 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm43550-201ENSMUST00000200597 303 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm44818-201ENSMUST00000206608 358 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 CT025538.2-201ENSMUST00000226083 772 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm26446-201ENSMUST00000082455 103 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm22622-201ENSMUST00000082870 129 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.33□□□□□ -2.04
Trim3Q9R1R2 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm22782-201ENSMUST00000104082 132 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm24670-201ENSMUST00000104154 132 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm22674-201ENSMUST00000104413 131 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm23600-201ENSMUST00000157260 71 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm23137-201ENSMUST00000157559 107 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm8580-201ENSMUST00000160295 464 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm16232-201ENSMUST00000162856 167 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm9071-201ENSMUST00000165915 474 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm24816-201ENSMUST00000175311 151 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Mir6335-201ENSMUST00000184081 98 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm29073-201ENSMUST00000185563 664 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm18185-201ENSMUST00000186725 667 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm29165-201ENSMUST00000190655 664 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm29211-201ENSMUST00000191470 664 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm44519-201ENSMUST00000206486 122 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm44754-201ENSMUST00000208155 400 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm45678-201ENSMUST00000210509 295 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm24268-201ENSMUST00000082990 110 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.32□□□□□ -2.04
Trim3Q9R1R2 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm22771-201ENSMUST00000104449 91 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm15029-201ENSMUST00000119742 199 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm6574-201ENSMUST00000120037 362 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm23124-201ENSMUST00000157650 107 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm23059-201ENSMUST00000158978 107 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm15900-201ENSMUST00000161584 342 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.31□□□□□ -2.04
Trim3Q9R1R2 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Mir6917-201ENSMUST00000184111 61 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm29429-201ENSMUST00000187071 121 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm45366-201ENSMUST00000209828 384 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.31□□□□□ -2.04
Trim3Q9R1R2 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 161.3 ms