Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm25407-201ENSMUST00000104102 134 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm23911-201ENSMUST00000104596 134 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Mir743b-201ENSMUST00000104751 77 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm14736-201ENSMUST00000121470 336 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm6265-201ENSMUST00000149263 231 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm22560-201ENSMUST00000157332 120 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm22080-201ENSMUST00000157591 106 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm23895-201ENSMUST00000158108 160 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm24879-201ENSMUST00000158386 143 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Snord93-201ENSMUST00000175580 71 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm8532-201ENSMUST00000179174 461 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm29658-201ENSMUST00000185404 230 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm29350-201ENSMUST00000189141 541 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm38050-201ENSMUST00000191904 238 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm37353-201ENSMUST00000194497 313 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm19252-201ENSMUST00000204705 305 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm45402-201ENSMUST00000211796 223 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm7422-201ENSMUST00000220115 640 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm22247-201ENSMUST00000082476 131 ntBASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Chmp1b1Q99LU0 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm11598-201ENSMUST00000119257 357 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm13475-201ENSMUST00000119290 234 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm11785-201ENSMUST00000120165 601 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm24780-201ENSMUST00000157635 143 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm23411-201ENSMUST00000157988 62 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm23409-201ENSMUST00000158516 237 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm23704-201ENSMUST00000158844 340 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm15914-201ENSMUST00000161922 309 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm19932-201ENSMUST00000177033 313 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Mir7093-201ENSMUST00000184195 101 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm27869-201ENSMUST00000184327 122 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm44041-201ENSMUST00000203678 396 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm43884-201ENSMUST00000204251 559 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 AC116465.1-201ENSMUST00000220324 235 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Olfr895-201ENSMUST00000093864 951 ntBASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Chmp1b1Q99LU0 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm25848-201ENSMUST00000116790 144 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm23956-201ENSMUST00000157211 119 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm22538-201ENSMUST00000158169 299 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm22853-201ENSMUST00000174974 131 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Chmp1b1Q99LU0 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm7329-201ENSMUST00000185915 210 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm28779-201ENSMUST00000189678 323 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm43007-201ENSMUST00000197618 291 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm44223-201ENSMUST00000204854 114 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC2.53□□□□□ -2
Chmp1b1Q99LU0 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm24037-201ENSMUST00000082871 180 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm25579-201ENSMUST00000083407 106 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Gm3867-201ENSMUST00000086108 279 ntBASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Chmp1b1Q99LU0 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Chmp1b1Q99LU0 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.52□□□□□ -2.01
Chmp1b1Q99LU0 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Chmp1b1Q99LU0 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.52□□□□□ -2.01
Chmp1b1Q99LU0 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Chmp1b1Q99LU0 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Chmp1b1Q99LU0 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 151.4 ms