Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.24□□□□□ -1.73
Ubp1Q811S7 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm22970-201ENSMUST00000083304 186 ntBASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.24□□□□□ -1.73
Ubp1Q811S7 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ubp1Q811S7 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ubp1Q811S7 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubp1Q811S7 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm26367-201ENSMUST00000104165 132 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Mir105-201ENSMUST00000104655 80 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm15426-201ENSMUST00000117823 556 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm12797-201ENSMUST00000118645 273 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm5396-201ENSMUST00000121222 532 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm12443-201ENSMUST00000122308 323 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm22026-201ENSMUST00000122735 281 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm25115-201ENSMUST00000157187 140 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm22538-201ENSMUST00000158169 299 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Mir7028-201ENSMUST00000185016 64 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm27414-201ENSMUST00000185033 381 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm37670-201ENSMUST00000193622 229 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Igkv13-76-201ENSMUST00000197621 347 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm30674-201ENSMUST00000214523 392 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 CT030159.4-201ENSMUST00000221966 395 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 AC135292.1-201ENSMUST00000227665 204 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 AC165284.1-201ENSMUST00000228614 458 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ubp1Q811S7 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Ubp1Q811S7 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ubp1Q811S7 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.22□□□□□ -1.73
Ubp1Q811S7 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ubp1Q811S7 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ubp1Q811S7 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Ubp1Q811S7 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Ubp1Q811S7 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ubp1Q811S7 Gm24987-201ENSMUST00000104453 134 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Gm14402-201ENSMUST00000122217 508 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.22□□□□□ -1.73
Ubp1Q811S7 Trav20-201ENSMUST00000142754 347 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Gm23234-201ENSMUST00000157304 134 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Gm23023-201ENSMUST00000158767 109 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Gm43586-201ENSMUST00000195948 310 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Gm18341-201ENSMUST00000197538 622 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ubp1Q811S7 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ubp1Q811S7 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC4.22□□□□□ -1.73
Ubp1Q811S7 Gm22744-201ENSMUST00000083444 65 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Gm23099-201ENSMUST00000083454 139 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Gm23875-201ENSMUST00000083711 318 ntBASIC4.22□□□□□ -1.73
Ubp1Q811S7 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ubp1Q811S7 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ubp1Q811S7 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ubp1Q811S7 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ubp1Q811S7 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ubp1Q811S7 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
Ubp1Q811S7 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.21□□□□□ -1.73
Ubp1Q811S7 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Ubp1Q811S7 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Ubp1Q811S7 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ubp1Q811S7 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ubp1Q811S7 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm23013-201ENSMUST00000104146 106 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm25783-201ENSMUST00000122525 190 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm10444-201ENSMUST00000126708 148 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm22378-201ENSMUST00000157481 111 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm24664-201ENSMUST00000158939 100 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm27540-201ENSMUST00000184950 187 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm28627-201ENSMUST00000186141 453 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm44429-201ENSMUST00000203542 186 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm45209-201ENSMUST00000207122 353 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm44594-201ENSMUST00000208982 407 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm23510-201ENSMUST00000083083 163 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ubp1Q811S7 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ubp1Q811S7 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ubp1Q811S7 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Ubp1Q811S7 Gm42482-201ENSMUST00000198904 1947 ntBASIC4.21□□□□□ -1.74
Ubp1Q811S7 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ubp1Q811S7 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ubp1Q811S7 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Ubp1Q811S7 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Ubp1Q811S7 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ubp1Q811S7 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
Ubp1Q811S7 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ubp1Q811S7 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Ubp1Q811S7 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 169.8 ms