Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.085e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.095e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.16□□□□□ -1.15e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.02□□□□□ -1.125e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.01□□□□□ -1.135e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.8□□□□□ -1.165e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC7.79□□□□□ -1.165e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC7.79□□□□□ -1.165e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC7.79□□□□□ -1.165e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC7.72□□□□□ -1.175e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC7.72□□□□□ -1.175e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.69□□□□□ -1.185e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.49□□□□□ -1.215e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.48□□□□□ -1.215e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.48□□□□□ -1.215e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.47□□□□□ -1.215e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC7.44□□□□□ -1.225e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.38□□□□□ -1.235e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.23□□□□□ -1.255e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.12□□□□□ -1.275e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.04□□□□□ -1.285e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7□□□□□ -1.295e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.79□□□□□ -1.325e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.79□□□□□ -1.325e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.51□□□□□ -1.375e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.45□□□□□ -1.385e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.17□□□□□ -1.425e-7■■■□□ 16.1
EXOSC5Q9NQT4 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.17□□□□□ -1.425e-7■■■□□ 16.1
EXOSC5Q9NQT4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.442e-7■■■□□ 16
EXOSC5Q9NQT4 GNB1L-204ENST00000453108 702 ntTSL 317.07■□□□□ 0.322e-7■■■□□ 16
EXOSC5Q9NQT4 GNB1L-206ENST00000481086 854 ntTSL 315.1■□□□□ 0.012e-7■■■□□ 16
EXOSC5Q9NQT4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.75□□□□□ -0.052e-7■■■□□ 16
EXOSC5Q9NQT4 GNB1L-205ENST00000460402 1197 ntTSL 314.17□□□□□ -0.142e-7■■■□□ 16
EXOSC5Q9NQT4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.86□□□□□ -0.192e-7■■■□□ 16
EXOSC5Q9NQT4 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.362e-7■■■□□ 16
EXOSC5Q9NQT4 PWP1-201ENST00000412830 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.752e-7■■■□□ 16
EXOSC5Q9NQT4 AC020687.1-201ENST00000560439 448 ntTSL 3 BASIC8.01□□□□□ -1.132e-7■■■□□ 16
EXOSC5Q9NQT4 TRIM28-204ENST00000594806 861 ntTSL 520.83■□□□□ 0.932e-6■■■□□ 16
EXOSC5Q9NQT4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.63■□□□□ 0.732e-6■■■□□ 16
EXOSC5Q9NQT4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.562e-6■■■□□ 16
EXOSC5Q9NQT4 LRP6-202ENST00000535731 562 ntTSL 316.26■□□□□ 0.194e-6■■■□□ 16
EXOSC5Q9NQT4 TRIM28-203ENST00000593582 533 ntTSL 311.94□□□□□ -0.52e-6■■■□□ 16
EXOSC5Q9NQT4 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC6.61□□□□□ -1.354e-6■■■□□ 16
EXOSC5Q9NQT4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.74e-6■■■□□ 16
EXOSC5Q9NQT4 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.862e-7■■■□□ 16
EXOSC5Q9NQT4 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.862e-7■■■□□ 16
EXOSC5Q9NQT4 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.862e-7■■■□□ 16
EXOSC5Q9NQT4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.83e-6■■■□□ 16
EXOSC5Q9NQT4 SUN1-222ENST00000457861 2975 ntTSL 214.15□□□□□ -0.143e-6■■■□□ 16
EXOSC5Q9NQT4 GET4-203ENST00000412734 873 ntTSL 212□□□□□ -0.493e-6■■■□□ 16
EXOSC5Q9NQT4 FARP1-224ENST00000598389 747 ntTSL 55.72□□□□□ -1.492e-6■■■□□ 16
EXOSC5Q9NQT4 ATL2-205ENST00000416222 593 ntTSL 412.66□□□□□ -0.382e-6■■■□□ 15.9
EXOSC5Q9NQT4 MED13L-203ENST00000548743 568 ntTSL 36.08□□□□□ -1.441e-6■■■□□ 15.9
EXOSC5Q9NQT4 WDR60-203ENST00000444851 2769 ntTSL 1 (best)11.96□□□□□ -0.54e-7■■■□□ 15.8
EXOSC5Q9NQT4 WDR60-205ENST00000467220 5410 ntTSL 211.47□□□□□ -0.574e-7■■■□□ 15.8
EXOSC5Q9NQT4 UBE2E1-207ENST00000475680 1138 ntTSL 517.21■□□□□ 0.357e-6■■■□□ 15.8
EXOSC5Q9NQT4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.217e-6■■■□□ 15.8
EXOSC5Q9NQT4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.11■□□□□ 0.017e-6■■■□□ 15.8
EXOSC5Q9NQT4 UBE2E1-204ENST00000442670 622 ntTSL 213.47□□□□□ -0.257e-6■■■□□ 15.8
EXOSC5Q9NQT4 UBE2E1-211ENST00000495141 582 ntTSL 213.37□□□□□ -0.277e-6■■■□□ 15.8
EXOSC5Q9NQT4 STK24-206ENST00000481288 656 ntTSL 312□□□□□ -0.491e-6■■■□□ 15.8
EXOSC5Q9NQT4 UBE2E1-203ENST00000424381 1224 ntTSL 2 BASIC7.75□□□□□ -1.177e-6■■■□□ 15.8
EXOSC5Q9NQT4 UBE2E1-206ENST00000467766 585 ntTSL 2 BASIC7.75□□□□□ -1.177e-6■■■□□ 15.8
EXOSC5Q9NQT4 UBE2E1-205ENST00000452012 1166 ntTSL 35.51□□□□□ -1.537e-6■■■□□ 15.8
EXOSC5Q9NQT4 CYP51A1-203ENST00000435873 556 ntTSL 43.09□□□□□ -1.913e-7■■■□□ 15.8
EXOSC5Q9NQT4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.519e-7■■■□□ 15.8
EXOSC5Q9NQT4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.559e-7■■■□□ 15.8
EXOSC5Q9NQT4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.762e-6■■■□□ 15.8
EXOSC5Q9NQT4 RALBP1-205ENST00000585015 945 ntTSL 319.24■□□□□ 0.671e-6■■■□□ 15.7
EXOSC5Q9NQT4 RALBP1-202ENST00000383432 4224 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.731e-6■■■□□ 15.7
EXOSC5Q9NQT4 RALBP1-201ENST00000019317 4368 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.841e-6■■■□□ 15.7
EXOSC5Q9NQT4 RALBP1-203ENST00000458039 836 ntTSL 39.46□□□□□ -0.91e-6■■■□□ 15.7
EXOSC5Q9NQT4 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.29□□□□□ -1.241e-6■■■□□ 15.7
EXOSC5Q9NQT4 RALBP1-204ENST00000577221 503 ntTSL 37.15□□□□□ -1.261e-6■■■□□ 15.7
EXOSC5Q9NQT4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.727e-7■■■□□ 15.7
EXOSC5Q9NQT4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.627e-7■■■□□ 15.7
EXOSC5Q9NQT4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.577e-7■■■□□ 15.7
EXOSC5Q9NQT4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.377e-7■■■□□ 15.7
EXOSC5Q9NQT4 SLC19A1-203ENST00000417954 3572 ntTSL 1 (best)12.71□□□□□ -0.377e-7■■■□□ 15.7
EXOSC5Q9NQT4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.2■□□□□ 0.829e-8■■■□□ 15.7
EXOSC5Q9NQT4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.84■□□□□ 0.619e-8■■■□□ 15.7
EXOSC5Q9NQT4 SSX2IP-207ENST00000481102 2457 ntTSL 517.2■□□□□ 0.349e-8■■■□□ 15.7
EXOSC5Q9NQT4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.23■□□□□ 0.039e-8■■■□□ 15.7
EXOSC5Q9NQT4 SSX2IP-202ENST00000422026 759 ntTSL 312.23□□□□□ -0.459e-8■■■□□ 15.7
EXOSC5Q9NQT4 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.589e-8■■■□□ 15.7
EXOSC5Q9NQT4 SSX2IP-206ENST00000476905 2272 ntTSL 27.13□□□□□ -1.279e-8■■■□□ 15.7
EXOSC5Q9NQT4 SSX2IP-205ENST00000460500 2116 ntTSL 55.36□□□□□ -1.559e-8■■■□□ 15.7
EXOSC5Q9NQT4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.7■□□□□ 0.747e-7■■■□□ 15.7
EXOSC5Q9NQT4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.12■□□□□ 0.177e-7■■■□□ 15.7
EXOSC5Q9NQT4 HSD17B12-212ENST00000636722 540 ntTSL 416.12■□□□□ 0.177e-7■■■□□ 15.7
EXOSC5Q9NQT4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.067e-7■■■□□ 15.7
EXOSC5Q9NQT4 HSD17B12-211ENST00000636007 563 ntTSL 414.76□□□□□ -0.057e-7■■■□□ 15.7
EXOSC5Q9NQT4 HSD17B12-206ENST00000531185 611 ntTSL 413.48□□□□□ -0.257e-7■■■□□ 15.7
EXOSC5Q9NQT4 HSD17B12-205ENST00000527433 559 ntTSL 411.74□□□□□ -0.537e-7■■■□□ 15.7
EXOSC5Q9NQT4 HSD17B12-214ENST00000638034 546 ntTSL 54.9□□□□□ -1.637e-7■■■□□ 15.7
EXOSC5Q9NQT4 PPP6R3-216ENST00000529172 500 ntTSL 24.18□□□□□ -1.742e-6■■■□□ 15.7
EXOSC5Q9NQT4 PPP6R3-222ENST00000531244 687 ntTSL 53.03□□□□□ -1.922e-6■■■□□ 15.7
EXOSC5Q9NQT4 SAMSN1-205ENST00000493640 282 ntTSL 36.23□□□□□ -1.413e-6■■■□□ 15.6
EXOSC5Q9NQT4 HIVEP1-203ENST00000442081 1044 ntTSL 315.76■□□□□ 0.111e-6■■■□□ 15.6
EXOSC5Q9NQT4 HIVEP1-204ENST00000478545 576 ntTSL 413.19□□□□□ -0.31e-6■■■□□ 15.6
Retrieved 100 of 8,799 protein–RNA pairs in 354.9 ms