Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm12878-201ENSMUST00000118744 332 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm14736-201ENSMUST00000121470 336 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm14366-201ENSMUST00000121970 730 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm23212-201ENSMUST00000122718 60 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm20660-201ENSMUST00000177515 289 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm25175-201ENSMUST00000178712 79 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm38311-201ENSMUST00000192945 165 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm43193-201ENSMUST00000197732 441 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm17906-201ENSMUST00000202480 901 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Mir682-201ENSMUST00000102281 96 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm12697-201ENSMUST00000118008 667 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm11460-201ENSMUST00000118200 361 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm12191-201ENSMUST00000118307 348 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm9703-201ENSMUST00000119573 343 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm13581-201ENSMUST00000120675 278 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm13913-201ENSMUST00000121126 260 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm11849-201ENSMUST00000121293 261 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm23980-201ENSMUST00000157135 158 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm26393-201ENSMUST00000157625 129 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Mir1927-201ENSMUST00000158579 109 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm24546-201ENSMUST00000158652 102 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm23476-201ENSMUST00000158881 274 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm24315-201ENSMUST00000177835 127 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm22131-201ENSMUST00000178415 94 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm27220-201ENSMUST00000183453 262 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm37037-201ENSMUST00000194475 424 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm43582-201ENSMUST00000196149 343 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm43264-201ENSMUST00000202284 325 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm45879-201ENSMUST00000212521 392 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm7692-201ENSMUST00000213534 409 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Mir423-201ENSMUST00000083584 109 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm10343-201ENSMUST00000096279 348 ntBASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trim3Q9R1R2 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm15266-201ENSMUST00000119635 255 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm16428-201ENSMUST00000121193 723 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm12071-201ENSMUST00000121968 469 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm13368-201ENSMUST00000122443 430 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm23981-201ENSMUST00000157136 106 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm23068-201ENSMUST00000158239 293 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm10193-201ENSMUST00000188288 231 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Trbv22-201ENSMUST00000191697 291 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm37353-201ENSMUST00000194497 313 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm7871-201ENSMUST00000195346 618 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm44923-201ENSMUST00000206673 85 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.35□□□□□ -2.03
Trim3Q9R1R2 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm22247-201ENSMUST00000082476 131 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 Gm23247-201ENSMUST00000083373 107 ntBASIC2.35□□□□□ -2.03
Trim3Q9R1R2 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm22936-201ENSMUST00000103955 126 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm17132-201ENSMUST00000109542 1158 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm14073-201ENSMUST00000117344 381 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm13720-201ENSMUST00000120741 196 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm12748-201ENSMUST00000120763 504 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm23144-201ENSMUST00000180226 107 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm11392-201ENSMUST00000181419 710 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Mir496b-201ENSMUST00000184935 113 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Trbv24-201ENSMUST00000194614 347 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 Gm45445-201ENSMUST00000209586 232 ntBASIC2.34□□□□□ -2.03
Trim3Q9R1R2 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 205.1 ms