Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm24211-201ENSMUST00000158264 107 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm23025-201ENSMUST00000158769 111 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm29597-201ENSMUST00000188035 308 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Mir7232-201ENSMUST00000197929 74 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm44990-201ENSMUST00000203922 217 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm43954-201ENSMUST00000204634 544 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm46312-201ENSMUST00000220961 420 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 AC126673.2-201ENSMUST00000221052 686 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Mir448-201ENSMUST00000083516 112 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm14910-201ENSMUST00000121037 1805 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Mir667-201ENSMUST00000102441 92 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm13614-201ENSMUST00000117306 503 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm15077-201ENSMUST00000122344 362 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm22225-201ENSMUST00000157358 278 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm20534-201ENSMUST00000172957 172 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm25412-201ENSMUST00000180258 107 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm27428-201ENSMUST00000184289 110 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm44634-201ENSMUST00000206119 152 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm24624-201ENSMUST00000082617 164 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 n-R5s50-201ENSMUST00000083168 111 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm24928-201ENSMUST00000083399 107 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Gm25897-201ENSMUST00000083709 107 ntBASIC1.84□□□□□ -2.11
Col4a4Q9QZR9 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Col4a4Q9QZR9 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Col4a4Q9QZR9 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.84□□□□□ -2.12
Col4a4Q9QZR9 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Col4a4Q9QZR9 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.84□□□□□ -2.12
Col4a4Q9QZR9 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.84□□□□□ -2.12
Col4a4Q9QZR9 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm24342-201ENSMUST00000103907 104 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm11367-201ENSMUST00000117802 120 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm14887-201ENSMUST00000119522 663 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm22960-201ENSMUST00000122517 104 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm25976-201ENSMUST00000158695 130 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm23022-201ENSMUST00000158768 180 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm23053-201ENSMUST00000175136 96 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm27271-201ENSMUST00000183509 170 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm27544-201ENSMUST00000185069 155 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm29550-201ENSMUST00000185543 285 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm45023-201ENSMUST00000207951 379 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 AC157570.3-201ENSMUST00000219281 205 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 AC167977.1-201ENSMUST00000221384 234 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm22810-201ENSMUST00000082741 158 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm24661-201ENSMUST00000083205 104 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm23097-201ENSMUST00000083448 105 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm24984-201ENSMUST00000104454 133 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm22486-201ENSMUST00000116815 137 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm25107-201ENSMUST00000122472 129 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm23415-201ENSMUST00000175519 83 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm11392-201ENSMUST00000181419 710 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm29184-201ENSMUST00000190038 334 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm18775-201ENSMUST00000190763 586 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm37979-201ENSMUST00000193065 712 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.83□□□□□ -2.12
Col4a4Q9QZR9 Gm19032-201ENSMUST00000208584 592 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 146.1 ms