Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm11386-201ENSMUST00000117761 347 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm15106-201ENSMUST00000119691 821 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm14638-201ENSMUST00000121338 216 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm22322-201ENSMUST00000157151 111 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm24958-201ENSMUST00000158009 97 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm23523-201ENSMUST00000180190 107 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm27786-201ENSMUST00000184337 70 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm43239-201ENSMUST00000200131 201 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm7751-201ENSMUST00000212868 709 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm18015-201ENSMUST00000214879 316 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm30534-201ENSMUST00000217928 207 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.58□□□□□ -2
Chmp1b1Q99LU0 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Gm10088-201ENSMUST00000074116 423 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Chmp1b1Q99LU0 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.58□□□□□ -2
Chmp1b1Q99LU0 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm25500-201ENSMUST00000104426 123 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm14448-201ENSMUST00000116383 210 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm15223-201ENSMUST00000120989 826 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm12779-201ENSMUST00000121496 143 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm11834-201ENSMUST00000122257 585 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm24443-201ENSMUST00000157242 132 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm24546-201ENSMUST00000158652 102 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm17187-201ENSMUST00000164622 410 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm17166-201ENSMUST00000172006 431 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm27608-201ENSMUST00000184822 162 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm28650-201ENSMUST00000188413 411 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm37455-201ENSMUST00000191993 529 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm44393-201ENSMUST00000197418 138 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm44465-201ENSMUST00000199536 114 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm35931-201ENSMUST00000203931 448 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm43955-201ENSMUST00000204332 142 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm19177-201ENSMUST00000204520 613 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm44266-201ENSMUST00000205235 500 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm7495-201ENSMUST00000215099 426 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.57□□□□□ -2
Chmp1b1Q99LU0 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.57□□□□□ -2
Chmp1b1Q99LU0 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm22656-201ENSMUST00000104199 171 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm26341-201ENSMUST00000104561 134 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm15167-201ENSMUST00000121997 187 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm14578-201ENSMUST00000122166 391 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm13424-201ENSMUST00000122301 354 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm22718-201ENSMUST00000122701 315 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm22026-201ENSMUST00000122735 281 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm13901-201ENSMUST00000137252 468 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm16354-201ENSMUST00000155376 150 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm22651-201ENSMUST00000157872 94 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm24959-201ENSMUST00000157924 146 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm23016-201ENSMUST00000158431 62 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm26406-201ENSMUST00000158503 124 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm17186-201ENSMUST00000171742 456 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm25243-201ENSMUST00000174912 207 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Snord53-201ENSMUST00000175146 78 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm26622-201ENSMUST00000180520 298 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.56□□□□□ -2
Chmp1b1Q99LU0 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm37007-201ENSMUST00000194234 319 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm18551-201ENSMUST00000195594 642 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm19140-201ENSMUST00000209790 421 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm6012-201ENSMUST00000210821 730 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.56□□□□□ -2
Chmp1b1Q99LU0 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm18696-201ENSMUST00000220103 274 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm20102-201ENSMUST00000222445 220 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm22970-201ENSMUST00000083304 186 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm23847-201ENSMUST00000083829 110 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.56□□□□□ -2
Chmp1b1Q99LU0 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 157.9 ms