Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.87□□□□□ -1.79
Brf1Q8CFK2 Gm26188-201ENSMUST00000179963 94 ntBASIC3.87□□□□□ -1.79
Brf1Q8CFK2 Gm25471-201ENSMUST00000180126 94 ntBASIC3.87□□□□□ -1.79
Brf1Q8CFK2 Gm26433-201ENSMUST00000180227 94 ntBASIC3.87□□□□□ -1.79
Brf1Q8CFK2 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.87□□□□□ -1.79
Brf1Q8CFK2 Gm22128-201ENSMUST00000180346 94 ntBASIC3.87□□□□□ -1.79
Brf1Q8CFK2 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Brf1Q8CFK2 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.87□□□□□ -1.79
Brf1Q8CFK2 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.87□□□□□ -1.79
Brf1Q8CFK2 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Brf1Q8CFK2 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Brf1Q8CFK2 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Brf1Q8CFK2 Gm5265-201ENSMUST00000076828 342 ntBASIC3.87□□□□□ -1.79
Brf1Q8CFK2 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Brf1Q8CFK2 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Brf1Q8CFK2 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Brf1Q8CFK2 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm15101-201ENSMUST00000178818 1502 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm23256-201ENSMUST00000102235 110 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm26140-201ENSMUST00000103807 110 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm22936-201ENSMUST00000103955 126 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm23852-201ENSMUST00000158376 77 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm22908-201ENSMUST00000177620 110 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm43355-201ENSMUST00000196541 346 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm44409-201ENSMUST00000198810 166 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm18453-201ENSMUST00000208000 626 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm9765-201ENSMUST00000043170 321 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Gm23721-201ENSMUST00000083005 107 ntBASIC3.86□□□□□ -1.79
Brf1Q8CFK2 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Brf1Q8CFK2 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm13343-201ENSMUST00000116474 105 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm14940-201ENSMUST00000119309 495 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm15223-201ENSMUST00000120989 826 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm14841-201ENSMUST00000121067 758 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm26102-201ENSMUST00000157251 284 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm23752-201ENSMUST00000157584 115 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm27410-201ENSMUST00000183851 115 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm27893-201ENSMUST00000184408 194 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm28755-201ENSMUST00000185773 199 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm42526-201ENSMUST00000198956 393 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm44657-201ENSMUST00000208568 450 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm45380-201ENSMUST00000210465 315 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Gm45778-201ENSMUST00000211959 153 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.85□□□□□ -1.79
Brf1Q8CFK2 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Brf1Q8CFK2 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Mir701-201ENSMUST00000102208 109 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Gm25325-201ENSMUST00000122559 86 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Gm23168-201ENSMUST00000157156 143 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Gm25224-201ENSMUST00000158195 68 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Gm24666-201ENSMUST00000158937 167 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Gm17062-201ENSMUST00000166987 461 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Gm21088-201ENSMUST00000190875 316 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Gm32033-201ENSMUST00000193483 339 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Gm22979-201ENSMUST00000082609 159 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Mir323-201ENSMUST00000083683 86 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 Gm26164-201ENSMUST00000083793 104 ntBASIC3.84□□□□□ -1.79
Brf1Q8CFK2 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Brf1Q8CFK2 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.84□□□□□ -1.8
Brf1Q8CFK2 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
Brf1Q8CFK2 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
Brf1Q8CFK2 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.8
Brf1Q8CFK2 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Brf1Q8CFK2 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Brf1Q8CFK2 Gm15844-201ENSMUST00000118016 576 ntBASIC3.83□□□□□ -1.8
Brf1Q8CFK2 Gm11456-201ENSMUST00000121070 256 ntBASIC3.83□□□□□ -1.8
Brf1Q8CFK2 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.83□□□□□ -1.8
Brf1Q8CFK2 Gm25391-201ENSMUST00000157342 134 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 134.6 ms