Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 AC159896.1-201ENSMUST00000215264 215 ntBASIC4.28□□□□□ -1.72
Ubp1Q811S7 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.28□□□□□ -1.72
Ubp1Q811S7 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.28□□□□□ -1.72
Ubp1Q811S7 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.28□□□□□ -1.72
Ubp1Q811S7 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.28□□□□□ -1.72
Ubp1Q811S7 Gm10298-201ENSMUST00000074801 265 ntBASIC4.28□□□□□ -1.72
Ubp1Q811S7 Gm22507-201ENSMUST00000082773 160 ntBASIC4.28□□□□□ -1.72
Ubp1Q811S7 Gm24817-201ENSMUST00000093672 105 ntBASIC4.28□□□□□ -1.72
Ubp1Q811S7 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Ubp1Q811S7 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.28□□□□□ -1.72
Ubp1Q811S7 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ubp1Q811S7 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ubp1Q811S7 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.28□□□□□ -1.72
Ubp1Q811S7 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ubp1Q811S7 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ubp1Q811S7 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ubp1Q811S7 Mdga2-203ENSMUST00000113942 423 ntBASIC4.27□□□□□ -1.73
Ubp1Q811S7 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.27□□□□□ -1.73
Ubp1Q811S7 Gm14845-201ENSMUST00000121259 306 ntBASIC4.27□□□□□ -1.73
Ubp1Q811S7 Gm22560-201ENSMUST00000157332 120 ntBASIC4.27□□□□□ -1.73
Ubp1Q811S7 Gm28020-201ENSMUST00000157739 67 ntBASIC4.27□□□□□ -1.73
Ubp1Q811S7 Gm23002-201ENSMUST00000179221 107 ntBASIC4.27□□□□□ -1.73
Ubp1Q811S7 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.27□□□□□ -1.73
Ubp1Q811S7 Mir376a-201ENSMUST00000197584 68 ntBASIC4.27□□□□□ -1.73
Ubp1Q811S7 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.27□□□□□ -1.73
Ubp1Q811S7 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.27□□□□□ -1.73
Ubp1Q811S7 AC154328.1-201ENSMUST00000225875 307 ntBASIC4.27□□□□□ -1.73
Ubp1Q811S7 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.27□□□□□ -1.73
Ubp1Q811S7 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.27□□□□□ -1.73
Ubp1Q811S7 Gm23850-201ENSMUST00000083830 169 ntBASIC4.27□□□□□ -1.73
Ubp1Q811S7 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ubp1Q811S7 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ubp1Q811S7 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ubp1Q811S7 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ubp1Q811S7 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ubp1Q811S7 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ubp1Q811S7 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ubp1Q811S7 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm13504-201ENSMUST00000117490 316 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm22453-201ENSMUST00000122801 318 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm25390-201ENSMUST00000157341 103 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm22316-201ENSMUST00000158012 216 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm24976-201ENSMUST00000158972 135 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm22859-201ENSMUST00000174978 122 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm27869-201ENSMUST00000184327 122 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm44521-201ENSMUST00000206469 217 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm6842-201ENSMUST00000211361 390 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm23727-201ENSMUST00000083352 164 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Mir202-201ENSMUST00000083568 72 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Mir471-201ENSMUST00000093596 67 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Mir504-201ENSMUST00000093602 79 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ubp1Q811S7 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ubp1Q811S7 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ubp1Q811S7 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ubp1Q811S7 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.26□□□□□ -1.73
Ubp1Q811S7 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ubp1Q811S7 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Ubp1Q811S7 Gm23948-201ENSMUST00000104030 132 ntBASIC4.25□□□□□ -1.73
Ubp1Q811S7 Gm22657-201ENSMUST00000104197 132 ntBASIC4.25□□□□□ -1.73
Ubp1Q811S7 Gm25543-201ENSMUST00000122678 312 ntBASIC4.25□□□□□ -1.73
Ubp1Q811S7 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.25□□□□□ -1.73
Ubp1Q811S7 Gm25720-201ENSMUST00000157503 105 ntBASIC4.25□□□□□ -1.73
Ubp1Q811S7 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ubp1Q811S7 Mir7031-201ENSMUST00000183860 65 ntBASIC4.25□□□□□ -1.73
Ubp1Q811S7 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ubp1Q811S7 Gm29104-201ENSMUST00000186304 222 ntBASIC4.25□□□□□ -1.73
Ubp1Q811S7 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.25□□□□□ -1.73
Ubp1Q811S7 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.25□□□□□ -1.73
Ubp1Q811S7 AC166113.1-201ENSMUST00000225258 475 ntBASIC4.25□□□□□ -1.73
Ubp1Q811S7 AC158982.2-201ENSMUST00000226283 184 ntBASIC4.25□□□□□ -1.73
Ubp1Q811S7 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ubp1Q811S7 Gm22245-201ENSMUST00000082479 103 ntBASIC4.25□□□□□ -1.73
Ubp1Q811S7 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Ubp1Q811S7 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ubp1Q811S7 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ubp1Q811S7 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ubp1Q811S7 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.25□□□□□ -1.73
Ubp1Q811S7 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.24□□□□□ -1.73
Ubp1Q811S7 Synpr-207ENSMUST00000223583 3362 ntBASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ubp1Q811S7 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ubp1Q811S7 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
Ubp1Q811S7 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm6574-201ENSMUST00000120037 362 ntBASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm25269-201ENSMUST00000122601 104 ntBASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm2182-201ENSMUST00000145243 663 ntBASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm25834-201ENSMUST00000158916 101 ntBASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm16326-201ENSMUST00000162843 414 ntBASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm13249-201ENSMUST00000177803 345 ntBASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm13144-201ENSMUST00000179385 345 ntBASIC4.24□□□□□ -1.73
Ubp1Q811S7 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.24□□□□□ -1.73
Ubp1Q811S7 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 212.4 ms