Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm29184-201ENSMUST00000190038 334 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm28169-201ENSMUST00000190342 345 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm29516-201ENSMUST00000190402 468 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm37727-201ENSMUST00000191637 819 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm37807-201ENSMUST00000194310 190 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm45772-201ENSMUST00000212961 240 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Snord104-201ENSMUST00000083192 70 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Trim3Q9R1R2 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.4□□□□□ -2.02
Trim3Q9R1R2 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Trim3Q9R1R2 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Gm24122-201ENSMUST00000104107 132 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Gm12513-201ENSMUST00000118617 352 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Gm14887-201ENSMUST00000119522 663 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Gm11358-201ENSMUST00000122310 373 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.4□□□□□ -2.03
Trim3Q9R1R2 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Mir7013-201ENSMUST00000183540 72 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Gm44472-201ENSMUST00000204922 943 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Gm45452-201ENSMUST00000210905 177 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.4□□□□□ -2.03
Trim3Q9R1R2 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Olfr895-201ENSMUST00000093864 951 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.4□□□□□ -2.03
Trim3Q9R1R2 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trim3Q9R1R2 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Mir344c-201ENSMUST00000103919 92 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm26247-201ENSMUST00000116702 91 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm12386-201ENSMUST00000117380 688 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm12793-201ENSMUST00000119268 292 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm14765-201ENSMUST00000121954 326 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm25624-201ENSMUST00000157222 275 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm26411-201ENSMUST00000157668 107 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm23223-201ENSMUST00000158119 127 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm22633-201ENSMUST00000179834 107 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm11395-201ENSMUST00000181011 499 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm27245-201ENSMUST00000184385 376 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm19252-201ENSMUST00000204705 305 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Gm45071-201ENSMUST00000205353 571 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trim3Q9R1R2 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trim3Q9R1R2 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.39□□□□□ -2.03
Trim3Q9R1R2 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Trim3Q9R1R2 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trim3Q9R1R2 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm25876-201ENSMUST00000104329 119 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm14049-201ENSMUST00000121009 636 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm14821-201ENSMUST00000121975 435 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm15167-201ENSMUST00000121997 187 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm25052-201ENSMUST00000122661 158 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm25808-201ENSMUST00000122784 284 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm14333-201ENSMUST00000130484 264 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm26186-201ENSMUST00000157689 125 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm24922-201ENSMUST00000158511 102 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm17538-201ENSMUST00000168236 327 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Mir6363-201ENSMUST00000184880 114 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm21673-201ENSMUST00000186640 436 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm21135-201ENSMUST00000189023 436 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm18341-201ENSMUST00000197538 622 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm42578-201ENSMUST00000199960 194 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.38□□□□□ -2.03
Trim3Q9R1R2 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.38□□□□□ -2.03
Trim3Q9R1R2 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm26147-201ENSMUST00000104479 114 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm22496-201ENSMUST00000104493 88 ntBASIC2.37□□□□□ -2.03
Trim3Q9R1R2 Gm24068-201ENSMUST00000104513 132 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 178.2 ms