Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm7209-201ENSMUST00000122339 333 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm23212-201ENSMUST00000122718 60 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm23032-201ENSMUST00000157995 107 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm17085-201ENSMUST00000165425 502 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm7438-201ENSMUST00000177664 639 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm7408-201ENSMUST00000178014 639 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm7386-201ENSMUST00000178020 639 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm3657-201ENSMUST00000178170 639 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm7415-201ENSMUST00000178205 639 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm7398-201ENSMUST00000178589 639 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm7391-201ENSMUST00000178680 639 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm7375-201ENSMUST00000179232 639 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm3681-201ENSMUST00000179940 639 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Mir6383-201ENSMUST00000184545 116 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Mir7665-201ENSMUST00000184907 63 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm28163-201ENSMUST00000187099 325 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm29641-201ENSMUST00000188955 259 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm29553-201ENSMUST00000189692 279 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm37417-201ENSMUST00000195257 454 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm43096-201ENSMUST00000196173 421 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm44881-201ENSMUST00000205425 367 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm45687-201ENSMUST00000209454 155 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm46136-201ENSMUST00000214730 565 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 n-R5s196-201ENSMUST00000083136 117 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.87□□□□□ -2.11
Col4a4Q9QZR9 Gm23431-201ENSMUST00000104006 107 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm26301-201ENSMUST00000104813 95 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm22091-201ENSMUST00000116908 127 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm15176-201ENSMUST00000117734 135 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm14677-201ENSMUST00000117866 486 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm11845-201ENSMUST00000117886 327 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm15452-201ENSMUST00000119877 240 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm24060-201ENSMUST00000157494 95 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm26173-201ENSMUST00000158416 136 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm22841-201ENSMUST00000158443 62 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm26968-201ENSMUST00000182894 481 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm27236-201ENSMUST00000184147 442 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm8676-201ENSMUST00000184206 637 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm27919-201ENSMUST00000185163 107 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Trbv12-3-201ENSMUST00000192675 372 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm18433-201ENSMUST00000192747 197 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm43171-201ENSMUST00000199882 291 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm29920-201ENSMUST00000206876 754 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm45146-201ENSMUST00000207108 221 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm18410-201ENSMUST00000207199 577 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 AC154245.1-201ENSMUST00000224615 601 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm11357-201ENSMUST00000119758 954 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Mir669a-7-201ENSMUST00000180364 87 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Mir669a-6-201ENSMUST00000196127 87 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm43541-201ENSMUST00000197208 581 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Mir669a-12-201ENSMUST00000197274 87 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Mir669a-5-201ENSMUST00000197439 87 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Mir669a-10-201ENSMUST00000197745 87 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Mir669a-11-201ENSMUST00000197952 87 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Mir669a-4-201ENSMUST00000198665 87 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Mir669a-9-201ENSMUST00000200087 87 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Mir669a-8-201ENSMUST00000200268 87 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.86□□□□□ -2.11
Col4a4Q9QZR9 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm12006-201ENSMUST00000120786 403 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm13210-201ENSMUST00000121483 273 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm15065-201ENSMUST00000121699 273 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm11834-201ENSMUST00000122257 585 ntBASIC1.85□□□□□ -2.11
Col4a4Q9QZR9 Gm24475-201ENSMUST00000157435 143 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 179.2 ms