Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm14785-201ENSMUST00000120185 539 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm25270-201ENSMUST00000122606 138 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm23559-201ENSMUST00000157824 103 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm23704-201ENSMUST00000158844 340 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm25361-201ENSMUST00000179358 76 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm17946-201ENSMUST00000186856 538 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm29216-201ENSMUST00000187117 492 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm28648-201ENSMUST00000190092 343 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm43556-201ENSMUST00000196186 681 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm8041-201ENSMUST00000199755 616 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm29848-201ENSMUST00000203107 295 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm2628-201ENSMUST00000218019 426 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm22810-201ENSMUST00000082741 158 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trim3Q9R1R2 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.44□□□□□ -2.02
Trim3Q9R1R2 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm25220-201ENSMUST00000157546 95 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm24436-201ENSMUST00000157889 302 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm24439-201ENSMUST00000157894 117 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm24306-201ENSMUST00000180229 79 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm27028-201ENSMUST00000182303 399 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm19193-201ENSMUST00000190263 590 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm37641-201ENSMUST00000193837 239 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm42509-201ENSMUST00000197390 781 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm6615-201ENSMUST00000199426 631 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trim3Q9R1R2 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm6954-201ENSMUST00000117416 225 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm13806-201ENSMUST00000117822 325 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm15106-201ENSMUST00000119691 821 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 AA413626-201ENSMUST00000121125 494 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm2830-201ENSMUST00000140330 385 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm25153-201ENSMUST00000157118 156 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm20718-201ENSMUST00000176058 259 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm24264-201ENSMUST00000179835 94 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm28299-201ENSMUST00000189908 339 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm37029-201ENSMUST00000195773 239 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm43804-201ENSMUST00000198280 456 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm43284-201ENSMUST00000200103 253 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm43955-201ENSMUST00000204332 142 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm24948-201ENSMUST00000082866 207 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Trim3Q9R1R2 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm26474-201ENSMUST00000116762 122 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Mir466k-201ENSMUST00000116774 122 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm15175-201ENSMUST00000117629 132 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm5287-201ENSMUST00000120666 598 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm23033-201ENSMUST00000157996 134 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm22611-201ENSMUST00000158288 150 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm22076-201ENSMUST00000158601 84 ntBASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trim3Q9R1R2 Gm24464-201ENSMUST00000179697 107 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 290.8 ms