Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.35□□□□□ -1.71
Ubp1Q811S7 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Mir193b-201ENSMUST00000103784 79 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm22784-201ENSMUST00000104088 132 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm24469-201ENSMUST00000104487 131 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm11931-201ENSMUST00000121630 447 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm13868-201ENSMUST00000122411 294 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm22536-201ENSMUST00000158171 134 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm24726-201ENSMUST00000158232 121 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm24006-201ENSMUST00000158462 132 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Spin2g-201ENSMUST00000178425 687 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm25198-201ENSMUST00000178574 110 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm28830-201ENSMUST00000188192 213 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm43680-201ENSMUST00000199466 340 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.35□□□□□ -1.71
Ubp1Q811S7 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.35□□□□□ -1.71
Ubp1Q811S7 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm3086-202ENSMUST00000221248 310 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm7065-201ENSMUST00000222150 474 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 AC115735.2-201ENSMUST00000227135 351 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Ubp1Q811S7 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ubp1Q811S7 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ubp1Q811S7 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.35□□□□□ -1.71
Ubp1Q811S7 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ubp1Q811S7 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.35□□□□□ -1.71
Ubp1Q811S7 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.34□□□□□ -1.71
Ubp1Q811S7 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ubp1Q811S7 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ubp1Q811S7 Gm23653-201ENSMUST00000116751 97 ntBASIC4.34□□□□□ -1.71
Ubp1Q811S7 Gm7123-201ENSMUST00000117647 213 ntBASIC4.34□□□□□ -1.71
Ubp1Q811S7 Gm12571-201ENSMUST00000118132 243 ntBASIC4.34□□□□□ -1.71
Ubp1Q811S7 Gm13992-201ENSMUST00000120558 156 ntBASIC4.34□□□□□ -1.71
Ubp1Q811S7 Gm23906-201ENSMUST00000157573 128 ntBASIC4.34□□□□□ -1.71
Ubp1Q811S7 Gm30341-201ENSMUST00000194363 289 ntBASIC4.34□□□□□ -1.71
Ubp1Q811S7 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Ubp1Q811S7 Mecom-201ENSMUST00000061088 348 ntBASIC4.34□□□□□ -1.71
Ubp1Q811S7 Gm23453-201ENSMUST00000083326 106 ntBASIC4.34□□□□□ -1.71
Ubp1Q811S7 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ubp1Q811S7 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ubp1Q811S7 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.34□□□□□ -1.71
Ubp1Q811S7 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.72
Ubp1Q811S7 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Ubp1Q811S7 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.34□□□□□ -1.72
Ubp1Q811S7 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Ubp1Q811S7 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Ubp1Q811S7 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ubp1Q811S7 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ubp1Q811S7 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ubp1Q811S7 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Ubp1Q811S7 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ubp1Q811S7 Gm24121-201ENSMUST00000102029 106 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ubp1Q811S7 Gm13432-201ENSMUST00000118861 241 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.33□□□□□ -1.72
Ubp1Q811S7 Gm24392-201ENSMUST00000158136 103 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 Gm24667-201ENSMUST00000158938 103 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 Gm2962-201ENSMUST00000159266 336 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ubp1Q811S7 Mir5136-201ENSMUST00000175573 76 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 Gm25024-201ENSMUST00000179667 104 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 Mir6540-201ENSMUST00000184886 108 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 Trbv6-201ENSMUST00000193743 276 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 Gm23370-202ENSMUST00000197008 129 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.33□□□□□ -1.72
Ubp1Q811S7 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC4.33□□□□□ -1.72
Ubp1Q811S7 AC155167.3-201ENSMUST00000226349 217 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ubp1Q811S7 Snord21-201ENSMUST00000082519 94 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Ubp1Q811S7 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.33□□□□□ -1.72
Ubp1Q811S7 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ubp1Q811S7 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ubp1Q811S7 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Ubp1Q811S7 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.32□□□□□ -1.72
Ubp1Q811S7 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ubp1Q811S7 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ubp1Q811S7 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ubp1Q811S7 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ubp1Q811S7 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.32□□□□□ -1.72
Ubp1Q811S7 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.32□□□□□ -1.72
Ubp1Q811S7 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.32□□□□□ -1.72
Ubp1Q811S7 Gm10059-201ENSMUST00000131139 171 ntBASIC4.32□□□□□ -1.72
Ubp1Q811S7 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ubp1Q811S7 Gm23982-201ENSMUST00000157141 106 ntBASIC4.32□□□□□ -1.72
Ubp1Q811S7 Gm23640-201ENSMUST00000157860 104 ntBASIC4.32□□□□□ -1.72
Ubp1Q811S7 Gm22968-201ENSMUST00000157955 118 ntBASIC4.32□□□□□ -1.72
Ubp1Q811S7 Gm25863-201ENSMUST00000158249 329 ntBASIC4.32□□□□□ -1.72
Ubp1Q811S7 Gm16545-201ENSMUST00000161968 463 ntBASIC4.32□□□□□ -1.72
Ubp1Q811S7 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ubp1Q811S7 Gm22450-201ENSMUST00000179641 107 ntBASIC4.32□□□□□ -1.72
Ubp1Q811S7 Gm25473-201ENSMUST00000180191 107 ntBASIC4.32□□□□□ -1.72
Ubp1Q811S7 Gm43704-201ENSMUST00000196164 496 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 200.4 ms