Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm27379-201ENSMUST00000183730 123 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm27817-201ENSMUST00000184302 233 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm27786-201ENSMUST00000184337 70 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm18692-201ENSMUST00000193047 511 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm43355-201ENSMUST00000196541 346 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm19089-201ENSMUST00000197207 613 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm45101-201ENSMUST00000208327 232 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm22508-201ENSMUST00000082772 110 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm23264-201ENSMUST00000083372 107 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm25411-201ENSMUST00000083760 151 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm23741-201ENSMUST00000097237 171 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Trim3Q9R1R2 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Gm13343-201ENSMUST00000116474 105 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Gm14793-201ENSMUST00000118739 311 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Gm23206-201ENSMUST00000122720 184 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Gm26275-201ENSMUST00000157101 268 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Gm22597-201ENSMUST00000157602 80 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Gm8392-201ENSMUST00000185647 835 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Gm44324-201ENSMUST00000198517 135 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.47□□□□□ -2.01
Trim3Q9R1R2 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Gm45387-201ENSMUST00000209792 632 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Gm3442-201ENSMUST00000216808 710 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Trim3Q9R1R2 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.46□□□□□ -2.01
Trim3Q9R1R2 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Snora36b-201ENSMUST00000104383 132 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Gm12393-201ENSMUST00000117084 848 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Gm13510-201ENSMUST00000118659 429 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Gm8880-201ENSMUST00000121800 454 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Gm24291-201ENSMUST00000157633 162 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Gm24784-201ENSMUST00000157640 62 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Gm24086-201ENSMUST00000175171 98 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Mir7081-201ENSMUST00000184490 75 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Gm28755-201ENSMUST00000185773 199 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Gm37757-201ENSMUST00000193072 210 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Trim3Q9R1R2 AC153541.1-201ENSMUST00000213786 294 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Gm22974-201ENSMUST00000083301 103 ntBASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trim3Q9R1R2 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm11221-201ENSMUST00000117230 597 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm11785-201ENSMUST00000120165 601 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm15223-201ENSMUST00000120989 826 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm15529-201ENSMUST00000121833 994 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trim3Q9R1R2 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm23078-201ENSMUST00000157848 148 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm22098-201ENSMUST00000157930 85 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm26214-201ENSMUST00000158581 107 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm8207-201ENSMUST00000171204 502 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm7329-201ENSMUST00000185915 210 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm37081-201ENSMUST00000192034 196 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm43669-201ENSMUST00000198229 436 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm44961-201ENSMUST00000207450 196 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Gm2436-201ENSMUST00000219562 774 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.45□□□□□ -2.02
Trim3Q9R1R2 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Mir208a-201ENSMUST00000083498 83 ntBASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trim3Q9R1R2 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 167.6 ms