Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm23152-201ENSMUST00000175322 116 ntBASIC0.5□□□□□ -2.33
Ush2AQ2QI47 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC0.5□□□□□ -2.33
Ush2AQ2QI47 Gm43925-201ENSMUST00000203498 206 ntBASIC0.5□□□□□ -2.33
Ush2AQ2QI47 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.5□□□□□ -2.33
Ush2AQ2QI47 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Mir574-201ENSMUST00000103854 78 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Mir6381-201ENSMUST00000183426 87 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm9541-201ENSMUST00000188409 502 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm40810-201ENSMUST00000219149 253 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 AC116656.1-201ENSMUST00000227040 755 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm25141-201ENSMUST00000083177 107 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Mir365-2-201ENSMUST00000083555 112 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm3563-201ENSMUST00000172963 1628 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm29604-201ENSMUST00000187176 163 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm43652-201ENSMUST00000196219 675 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Mir423-201ENSMUST00000083584 109 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm11357-201ENSMUST00000119758 954 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm23702-201ENSMUST00000158840 130 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm17064-201ENSMUST00000167690 452 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Hmga1b-202ENSMUST00000178955 120 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm18540-201ENSMUST00000204025 526 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm10038-201ENSMUST00000077233 441 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm15314-201ENSMUST00000120740 1887 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm9009-201ENSMUST00000117321 326 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Gm44332-201ENSMUST00000203712 433 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Snord49b-201ENSMUST00000082503 72 ntBASIC0.49□□□□□ -2.33
Ush2AQ2QI47 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Mir3096-201ENSMUST00000116685 71 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC0.48□□□□□ -2.33
Ush2AQ2QI47 CT009713.4-201ENSMUST00000224246 272 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm23735-201ENSMUST00000082551 134 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Mir224-201ENSMUST00000083608 82 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm23605-201ENSMUST00000157255 127 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm26378-201ENSMUST00000179093 107 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 AC130823.2-201ENSMUST00000226169 290 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 AC161572.1-201ENSMUST00000227486 640 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Mir878-201ENSMUST00000104680 78 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm12309-201ENSMUST00000119889 182 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm22535-201ENSMUST00000158174 119 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm43250-201ENSMUST00000196536 273 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.48□□□□□ -2.33
Ush2AQ2QI47 AC126690.1-201ENSMUST00000228898 397 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm6215-201ENSMUST00000119297 1386 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm37428-201ENSMUST00000193886 137 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm45522-201ENSMUST00000210784 166 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gm25802-201ENSMUST00000082639 77 ntBASIC0.48□□□□□ -2.33
Ush2AQ2QI47 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Mir1966-201ENSMUST00000158807 108 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Gm38060-201ENSMUST00000194822 464 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 AC069074.1-201ENSMUST00000220048 381 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Gm18414-201ENSMUST00000210858 694 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Gm23585-201ENSMUST00000157656 102 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Gm22485-201ENSMUST00000157990 109 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Gm43954-201ENSMUST00000204634 544 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Gm44211-201ENSMUST00000204867 145 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.47□□□□□ -2.33
Ush2AQ2QI47 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Gm17538-201ENSMUST00000168236 327 ntBASIC0.47□□□□□ -2.33
Ush2AQ2QI47 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm13614-201ENSMUST00000117306 503 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm26089-201ENSMUST00000157898 107 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm17113-201ENSMUST00000170118 171 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm21754-201ENSMUST00000177550 479 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm37281-201ENSMUST00000192412 439 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm45445-201ENSMUST00000209586 232 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm22980-201ENSMUST00000082608 70 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 n-R5s196-201ENSMUST00000083136 117 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm25106-201ENSMUST00000122672 134 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm24690-201ENSMUST00000157759 97 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm27415-201ENSMUST00000183720 95 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm29492-201ENSMUST00000187124 457 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm33354-201ENSMUST00000195448 906 ntBASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Ush2AQ2QI47 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Ush2AQ2QI47 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.46□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 152.7 ms