Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm43600-201ENSMUST00000202134 223 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm45522-201ENSMUST00000210784 166 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trim3Q9R1R2 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm22061-201ENSMUST00000082557 107 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm24126-201ENSMUST00000104111 106 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm13085-201ENSMUST00000118356 171 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm15986-201ENSMUST00000122153 400 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm23885-201ENSMUST00000122682 294 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm23352-201ENSMUST00000158428 64 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm20698-201ENSMUST00000175657 233 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm25670-201ENSMUST00000178423 107 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm26239-201ENSMUST00000178842 107 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm24267-201ENSMUST00000179841 107 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm27532-201ENSMUST00000183726 113 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Mir8106-201ENSMUST00000184520 139 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm24292-201ENSMUST00000082888 107 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm23848-201ENSMUST00000083826 106 ntBASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim3Q9R1R2 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm23128-201ENSMUST00000104257 132 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm14833-201ENSMUST00000118345 1027 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm7327-201ENSMUST00000120925 652 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm24082-201ENSMUST00000175175 83 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm23619-201ENSMUST00000178411 94 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm24713-201ENSMUST00000178850 107 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm25474-201ENSMUST00000179052 94 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm22047-201ENSMUST00000179176 94 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm25448-201ENSMUST00000180065 107 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm5116-201ENSMUST00000187732 463 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm29627-201ENSMUST00000187984 463 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm29263-201ENSMUST00000188718 463 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm37743-201ENSMUST00000194645 376 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm23128-202ENSMUST00000196578 133 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm42475-201ENSMUST00000201212 295 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm43901-201ENSMUST00000203247 453 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm44555-201ENSMUST00000209008 148 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm18346-201ENSMUST00000216782 325 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trim3Q9R1R2 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm10025-201ENSMUST00000079568 372 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm26458-201ENSMUST00000082832 128 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm24035-201ENSMUST00000082867 107 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm23096-201ENSMUST00000083447 107 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
Trim3Q9R1R2 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trim3Q9R1R2 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm26384-201ENSMUST00000102183 110 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm11556-201ENSMUST00000120751 288 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm25784-201ENSMUST00000122524 81 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm15878-201ENSMUST00000127561 306 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm24691-201ENSMUST00000157762 140 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm22290-201ENSMUST00000177655 107 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm22583-201ENSMUST00000178031 107 ntBASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim3Q9R1R2 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 183.9 ms