Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm11429-201ENSMUST00000119089 144 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm12646-201ENSMUST00000119144 238 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm14008-201ENSMUST00000120483 274 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm14287-201ENSMUST00000121060 117 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm24936-201ENSMUST00000122598 247 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm24914-201ENSMUST00000157285 313 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm24729-201ENSMUST00000158225 137 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm3027-201ENSMUST00000167579 451 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm3104-201ENSMUST00000171004 473 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Spin2g-201ENSMUST00000178425 687 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm26622-201ENSMUST00000180520 298 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm29350-201ENSMUST00000189141 541 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm19726-201ENSMUST00000205008 240 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm7407-201ENSMUST00000208301 568 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm5358-201ENSMUST00000212814 353 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim9Q8C7M3 AC154552.1-201ENSMUST00000222969 202 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim9Q8C7M3 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim9Q8C7M3 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.72□□□□□ -1.81
Trim9Q8C7M3 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Trim9Q8C7M3 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Trim9Q8C7M3 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.71□□□□□ -1.81
Trim9Q8C7M3 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm23577-201ENSMUST00000103950 110 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm13378-201ENSMUST00000117483 336 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm14541-201ENSMUST00000118985 157 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm12640-201ENSMUST00000120097 310 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm5123-201ENSMUST00000121905 837 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm14768-201ENSMUST00000122126 678 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm5755-201ENSMUST00000152394 837 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm24553-201ENSMUST00000158653 131 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm19498-201ENSMUST00000191128 331 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm17966-201ENSMUST00000193453 594 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm45245-201ENSMUST00000210082 376 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm33654-201ENSMUST00000221704 215 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm21937-201ENSMUST00000222825 218 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm18441-201ENSMUST00000223539 617 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm2710-201ENSMUST00000073196 603 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm25755-201ENSMUST00000083396 107 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Trim9Q8C7M3 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm25727-201ENSMUST00000104522 131 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Snord98-201ENSMUST00000116819 65 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm13873-201ENSMUST00000119208 427 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm12458-201ENSMUST00000119387 495 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm23865-201ENSMUST00000157723 97 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm22769-201ENSMUST00000158367 98 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm24577-201ENSMUST00000158580 63 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm10075-201ENSMUST00000162030 545 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm37128-201ENSMUST00000192599 232 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm18921-201ENSMUST00000221798 366 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm9318-201ENSMUST00000222444 438 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 CT010454.1-201ENSMUST00000225975 265 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.7□□□□□ -1.82
Trim9Q8C7M3 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Trim9Q8C7M3 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim9Q8C7M3 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim9Q8C7M3 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 196.5 ms