Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ubp1Q811S7 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ubp1Q811S7 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ubp1Q811S7 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm12934-201ENSMUST00000119221 343 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm12466-201ENSMUST00000121199 620 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm25107-201ENSMUST00000122472 129 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm22027-201ENSMUST00000122737 127 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm23585-201ENSMUST00000157656 102 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm24675-201ENSMUST00000158757 259 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm24308-201ENSMUST00000177773 114 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm26200-201ENSMUST00000180273 79 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm28825-201ENSMUST00000186233 238 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.42□□□□□ -1.7
Ubp1Q811S7 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm4714-201ENSMUST00000203395 279 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm44757-201ENSMUST00000206373 157 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm29774-201ENSMUST00000219270 436 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm22973-201ENSMUST00000083298 191 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Mir208a-201ENSMUST00000083498 83 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Mir181b-2-201ENSMUST00000083644 89 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.42□□□□□ -1.7
Ubp1Q811S7 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.41□□□□□ -1.7
Ubp1Q811S7 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Gm23836-201ENSMUST00000104434 129 ntBASIC4.41□□□□□ -1.7
Ubp1Q811S7 Gm15846-201ENSMUST00000116022 320 ntBASIC4.41□□□□□ -1.7
Ubp1Q811S7 Gm13714-201ENSMUST00000117313 221 ntBASIC4.41□□□□□ -1.7
Ubp1Q811S7 Gm9157-201ENSMUST00000117673 225 ntBASIC4.41□□□□□ -1.7
Ubp1Q811S7 Gm24594-201ENSMUST00000122502 99 ntBASIC4.41□□□□□ -1.7
Ubp1Q811S7 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Gm22243-201ENSMUST00000178754 120 ntBASIC4.41□□□□□ -1.7
Ubp1Q811S7 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Gm19244-201ENSMUST00000204340 253 ntBASIC4.41□□□□□ -1.7
Ubp1Q811S7 Gm44533-201ENSMUST00000207782 268 ntBASIC4.41□□□□□ -1.7
Ubp1Q811S7 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ubp1Q811S7 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.4□□□□□ -1.7
Ubp1Q811S7 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.4□□□□□ -1.7
Ubp1Q811S7 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.4□□□□□ -1.7
Ubp1Q811S7 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Ubp1Q811S7 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Ubp1Q811S7 Gm23193-201ENSMUST00000102427 82 ntBASIC4.4□□□□□ -1.71
Ubp1Q811S7 Gm22320-201ENSMUST00000157149 312 ntBASIC4.4□□□□□ -1.71
Ubp1Q811S7 Gm23960-201ENSMUST00000157206 131 ntBASIC4.4□□□□□ -1.71
Ubp1Q811S7 Gm22145-201ENSMUST00000157396 148 ntBASIC4.4□□□□□ -1.71
Ubp1Q811S7 Gm23331-201ENSMUST00000157423 108 ntBASIC4.4□□□□□ -1.71
Ubp1Q811S7 Gm23219-201ENSMUST00000158123 87 ntBASIC4.4□□□□□ -1.71
Ubp1Q811S7 Gm5258-201ENSMUST00000165437 327 ntBASIC4.4□□□□□ -1.71
Ubp1Q811S7 Gm9377-201ENSMUST00000207227 623 ntBASIC4.4□□□□□ -1.71
Ubp1Q811S7 Snord47-201ENSMUST00000083034 77 ntBASIC4.4□□□□□ -1.71
Ubp1Q811S7 Gm22350-201ENSMUST00000083924 156 ntBASIC4.4□□□□□ -1.71
Ubp1Q811S7 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ubp1Q811S7 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.4□□□□□ -1.71
Ubp1Q811S7 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Ubp1Q811S7 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Ubp1Q811S7 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ubp1Q811S7 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Ubp1Q811S7 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Ubp1Q811S7 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ubp1Q811S7 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ubp1Q811S7 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ubp1Q811S7 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Ubp1Q811S7 Gm13355-201ENSMUST00000117996 317 ntBASIC4.39□□□□□ -1.71
Ubp1Q811S7 Gm25428-201ENSMUST00000157608 114 ntBASIC4.39□□□□□ -1.71
Ubp1Q811S7 Gm10075-201ENSMUST00000162030 545 ntBASIC4.39□□□□□ -1.71
Ubp1Q811S7 Gm23638-201ENSMUST00000175073 126 ntBASIC4.39□□□□□ -1.71
Ubp1Q811S7 Gm23158-201ENSMUST00000175076 126 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 208.8 ms