Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Gm22563-201ENSMUST00000157333 269 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Gm25910-201ENSMUST00000157620 140 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Mir496b-201ENSMUST00000184935 113 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Gm27919-201ENSMUST00000185163 107 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Npn2-202ENSMUST00000189275 235 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Gm37692-201ENSMUST00000192633 232 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Gm37550-201ENSMUST00000193230 463 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Gm8125-201ENSMUST00000216602 738 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Gm4945-201ENSMUST00000075152 453 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Gm9174-201ENSMUST00000078149 255 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.92□□□□□ -1.94
Trim58Q5NCC9 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Mir344c-201ENSMUST00000103919 92 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm25773-201ENSMUST00000116718 127 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm25507-201ENSMUST00000116981 144 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm15231-201ENSMUST00000119174 447 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm13356-201ENSMUST00000121678 335 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm25066-201ENSMUST00000158145 123 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm24100-201ENSMUST00000178592 79 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm24137-201ENSMUST00000180055 79 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm22391-201ENSMUST00000180356 79 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm26652-202ENSMUST00000181672 475 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm18296-201ENSMUST00000192475 783 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm42578-201ENSMUST00000199960 194 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm44128-201ENSMUST00000204909 219 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm45173-201ENSMUST00000206819 305 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm45232-201ENSMUST00000207811 162 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trim58Q5NCC9 Gm26384-201ENSMUST00000102183 110 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm11693-201ENSMUST00000119625 565 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm12640-201ENSMUST00000120097 310 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.9□□□□□ -1.95
Trim58Q5NCC9 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm8580-201ENSMUST00000160295 464 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm25156-201ENSMUST00000179809 79 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm27161-201ENSMUST00000183960 562 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Mir6382-201ENSMUST00000184055 110 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm28343-201ENSMUST00000185386 112 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm37523-201ENSMUST00000194901 412 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm43026-201ENSMUST00000202972 325 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm6012-201ENSMUST00000210821 730 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm7751-201ENSMUST00000212868 709 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Trim58Q5NCC9 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm25586-201ENSMUST00000082499 112 ntBASIC2.9□□□□□ -1.95
Trim58Q5NCC9 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm12137-201ENSMUST00000119565 346 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm12433-201ENSMUST00000119659 255 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm14366-201ENSMUST00000121970 730 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm22718-201ENSMUST00000122701 315 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm22597-201ENSMUST00000157602 80 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm24211-201ENSMUST00000158264 107 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm25365-201ENSMUST00000158852 121 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm22716-201ENSMUST00000177596 107 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm26960-201ENSMUST00000182263 412 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Mir6993-201ENSMUST00000184912 65 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm28900-201ENSMUST00000185232 156 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm6651-201ENSMUST00000189471 271 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm3442-201ENSMUST00000216808 710 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Snord104-201ENSMUST00000083192 70 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Gm23096-201ENSMUST00000083447 107 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.89□□□□□ -1.95
Trim58Q5NCC9 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 160.4 ms