Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm32222-201ENSMUST00000203296 298 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.53□□□□□ -2
Trim3Q9R1R2 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.53□□□□□ -2
Trim3Q9R1R2 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm20304-201ENSMUST00000218168 444 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 AC158521.1-201ENSMUST00000225295 660 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.53□□□□□ -2
Trim3Q9R1R2 Mir137-201ENSMUST00000083635 73 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm24817-201ENSMUST00000093672 105 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.53□□□□□ -2.01
Trim3Q9R1R2 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2.01
Trim3Q9R1R2 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm24280-201ENSMUST00000104237 134 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm25500-201ENSMUST00000104426 123 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm14579-201ENSMUST00000117068 283 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm14918-201ENSMUST00000118153 268 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm9593-201ENSMUST00000166034 469 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm6788-201ENSMUST00000166459 270 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Mir5099-201ENSMUST00000175257 74 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm27755-201ENSMUST00000184623 132 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm34314-201ENSMUST00000203622 367 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm44041-201ENSMUST00000203678 396 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm44060-201ENSMUST00000204440 410 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm44609-201ENSMUST00000207157 460 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm45049-201ENSMUST00000207586 591 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm18703-201ENSMUST00000215318 333 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm17890-201ENSMUST00000221419 757 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm23249-201ENSMUST00000083369 161 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trim3Q9R1R2 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.52□□□□□ -2.01
Trim3Q9R1R2 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm26504-201ENSMUST00000102033 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm8217-201ENSMUST00000119136 465 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm15760-201ENSMUST00000119553 283 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm25621-201ENSMUST00000157223 114 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm25706-201ENSMUST00000157828 247 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm22733-201ENSMUST00000158094 91 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm26502-201ENSMUST00000177732 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm25350-201ENSMUST00000177849 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm23446-201ENSMUST00000177977 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm26201-201ENSMUST00000178047 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm24711-201ENSMUST00000178062 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm24609-201ENSMUST00000178166 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm23265-201ENSMUST00000178321 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm22812-201ENSMUST00000178329 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm26246-201ENSMUST00000178388 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm25155-201ENSMUST00000178450 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm24760-201ENSMUST00000178530 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm22285-201ENSMUST00000178576 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm22417-201ENSMUST00000178656 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm26270-201ENSMUST00000178690 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm23313-201ENSMUST00000178931 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm23089-201ENSMUST00000178947 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm24153-201ENSMUST00000179280 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm25597-201ENSMUST00000179388 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm25816-201ENSMUST00000179764 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm26188-201ENSMUST00000179963 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm26433-201ENSMUST00000180227 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm25528-201ENSMUST00000180264 132 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 Gm22128-201ENSMUST00000180346 94 ntBASIC2.51□□□□□ -2.01
Trim3Q9R1R2 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 172.7 ms