Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.99□□□□□ -2.09
Col4a4Q9QZR9 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm7133-201ENSMUST00000187797 2039 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm22761-201ENSMUST00000102278 96 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm12225-201ENSMUST00000117995 298 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm11577-201ENSMUST00000118030 737 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm6591-201ENSMUST00000121063 434 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm15488-201ENSMUST00000121682 670 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm23599-201ENSMUST00000157261 251 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm25341-201ENSMUST00000157461 268 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm26349-201ENSMUST00000157530 130 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm16588-201ENSMUST00000162889 355 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Zfp950-206ENSMUST00000178819 171 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Mup-ps9-201ENSMUST00000178847 545 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm9022-202ENSMUST00000183285 483 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm37616-201ENSMUST00000193974 322 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm44348-201ENSMUST00000200165 122 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm45912-201ENSMUST00000210646 543 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Gm24261-201ENSMUST00000083744 104 ntBASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col4a4Q9QZR9 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm44925-201ENSMUST00000208879 2110 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm12433-201ENSMUST00000119659 255 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm16100-201ENSMUST00000120489 231 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm14982-201ENSMUST00000121102 442 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm22478-201ENSMUST00000122570 154 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm26365-201ENSMUST00000179177 94 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm26652-202ENSMUST00000181672 475 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm38149-201ENSMUST00000191943 339 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Igkv13-82-201ENSMUST00000200308 346 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm19177-201ENSMUST00000204520 613 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm18252-203ENSMUST00000215855 757 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm46194-201ENSMUST00000218136 320 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 AC154426.1-201ENSMUST00000225614 1132 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Gm25582-201ENSMUST00000083412 110 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Mir421-201ENSMUST00000083575 76 ntBASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col4a4Q9QZR9 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.09
Col4a4Q9QZR9 Mir669l-201ENSMUST00000103771 98 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Mir466f-2-201ENSMUST00000104805 94 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm12803-201ENSMUST00000118907 821 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm11693-201ENSMUST00000119625 565 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm6587-201ENSMUST00000120219 613 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm23183-201ENSMUST00000122595 323 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm26099-201ENSMUST00000157248 109 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm25888-201ENSMUST00000157778 302 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm22555-201ENSMUST00000157801 62 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm24875-201ENSMUST00000158888 104 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm8161-201ENSMUST00000168739 481 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm20648-201ENSMUST00000175815 328 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm28552-201ENSMUST00000190725 388 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm45658-201ENSMUST00000209197 580 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 AC122484.1-201ENSMUST00000221578 177 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 AC126275.1-201ENSMUST00000224881 446 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm23347-201ENSMUST00000083823 82 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm43201-201ENSMUST00000195925 3416 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm25496-201ENSMUST00000104430 120 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm14007-201ENSMUST00000118288 210 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm15312-201ENSMUST00000118827 271 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm13574-201ENSMUST00000120482 394 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm15309-201ENSMUST00000121644 240 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm23887-201ENSMUST00000122683 172 ntBASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC1.96□□□□□ -2.1
Col4a4Q9QZR9 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 201.1 ms