Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Brf1Q8CFK2 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm23422-201ENSMUST00000102000 107 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm22195-201ENSMUST00000116861 108 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm12125-201ENSMUST00000117261 736 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm13711-201ENSMUST00000119708 453 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm13901-201ENSMUST00000137252 468 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm22380-201ENSMUST00000157479 95 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm24577-201ENSMUST00000158580 63 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm22891-201ENSMUST00000158641 164 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm26468-201ENSMUST00000158644 106 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm17072-201ENSMUST00000166673 658 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm22367-201ENSMUST00000178930 132 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm23003-201ENSMUST00000179948 107 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Mir6914-201ENSMUST00000184999 69 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm9696-202ENSMUST00000191541 830 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm43814-201ENSMUST00000197851 413 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm43405-201ENSMUST00000198642 337 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Brf1Q8CFK2 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Gm23851-201ENSMUST00000083831 103 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Brf1Q8CFK2 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.02□□□□□ -1.77
Brf1Q8CFK2 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Brf1Q8CFK2 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Brf1Q8CFK2 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Snord70-201ENSMUST00000104157 87 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm13510-201ENSMUST00000118659 429 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm11798-201ENSMUST00000119150 421 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm12458-201ENSMUST00000119387 495 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm14687-201ENSMUST00000120206 363 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm14761-201ENSMUST00000121363 262 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm24862-201ENSMUST00000179103 79 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm23310-201ENSMUST00000179105 79 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm25461-201ENSMUST00000179293 79 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm26866-201ENSMUST00000180414 802 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm27245-201ENSMUST00000184385 376 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm29352-201ENSMUST00000188054 544 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm44161-201ENSMUST00000203532 253 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm44794-201ENSMUST00000206550 411 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.01□□□□□ -1.77
Brf1Q8CFK2 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Brf1Q8CFK2 Gm42870-201ENSMUST00000199355 3470 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4□□□□□ -1.77
Brf1Q8CFK2 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Brf1Q8CFK2 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4□□□□□ -1.77
Brf1Q8CFK2 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC4□□□□□ -1.77
Brf1Q8CFK2 Gm11384-201ENSMUST00000121376 303 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 Gm15167-201ENSMUST00000121997 187 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 Gm5958-201ENSMUST00000147698 297 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 Gm25572-201ENSMUST00000157527 172 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 Gm8580-201ENSMUST00000160295 464 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 Gm10075-201ENSMUST00000162030 545 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 Gm3027-201ENSMUST00000167579 451 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 Gm9722-201ENSMUST00000194568 802 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC4□□□□□ -1.77
Brf1Q8CFK2 CT030247.1-201ENSMUST00000216810 267 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Brf1Q8CFK2 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
Brf1Q8CFK2 Gm25800-201ENSMUST00000082636 134 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 Gm24533-201ENSMUST00000083138 196 ntBASIC4□□□□□ -1.77
Brf1Q8CFK2 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Brf1Q8CFK2 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Brf1Q8CFK2 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Brf1Q8CFK2 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Brf1Q8CFK2 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Brf1Q8CFK2 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
Brf1Q8CFK2 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Brf1Q8CFK2 Gm11904-201ENSMUST00000120562 248 ntBASIC3.99□□□□□ -1.77
Brf1Q8CFK2 Gm14919-201ENSMUST00000120839 390 ntBASIC3.99□□□□□ -1.77
Brf1Q8CFK2 Gm12779-201ENSMUST00000121496 143 ntBASIC3.99□□□□□ -1.77
Brf1Q8CFK2 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.99□□□□□ -1.77
Brf1Q8CFK2 Gm23326-201ENSMUST00000157419 105 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 142.6 ms