Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm23713-201ENSMUST00000157353 70 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm22336-201ENSMUST00000157719 107 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm22615-201ENSMUST00000158102 70 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm26171-201ENSMUST00000158422 131 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm23702-201ENSMUST00000158840 130 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ubp1Q811S7 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm27387-201ENSMUST00000184583 116 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm8599-201ENSMUST00000193033 457 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm17951-201ENSMUST00000198536 496 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm43978-201ENSMUST00000203491 451 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm44054-201ENSMUST00000203814 372 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm10092-201ENSMUST00000077110 180 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ubp1Q811S7 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ubp1Q811S7 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
Ubp1Q811S7 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ubp1Q811S7 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ubp1Q811S7 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Mir541-201ENSMUST00000102097 90 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm14878-201ENSMUST00000118167 293 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm22321-201ENSMUST00000157152 104 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm25665-201ENSMUST00000157695 110 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm26312-201ENSMUST00000157769 165 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm24997-201ENSMUST00000157910 105 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm43604-201ENSMUST00000199799 705 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm45392-201ENSMUST00000210441 214 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm23678-201ENSMUST00000083157 107 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm23461-201ENSMUST00000083265 107 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.45□□□□□ -1.7
Ubp1Q811S7 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ubp1Q811S7 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ubp1Q811S7 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ubp1Q811S7 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.44□□□□□ -1.7
Ubp1Q811S7 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ubp1Q811S7 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm15714-201ENSMUST00000117168 250 ntBASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm12328-201ENSMUST00000118611 197 ntBASIC4.44□□□□□ -1.7
Ubp1Q811S7 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm25235-201ENSMUST00000179933 107 ntBASIC4.44□□□□□ -1.7
Ubp1Q811S7 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.44□□□□□ -1.7
Ubp1Q811S7 Mir6410-201ENSMUST00000184204 104 ntBASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm29657-201ENSMUST00000189807 342 ntBASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm42451-201ENSMUST00000197410 244 ntBASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm44520-201ENSMUST00000205447 802 ntBASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ubp1Q811S7 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.44□□□□□ -1.7
Ubp1Q811S7 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ubp1Q811S7 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ubp1Q811S7 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm37296-201ENSMUST00000192728 2922 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ubp1Q811S7 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Ubp1Q811S7 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ubp1Q811S7 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm14894-201ENSMUST00000117170 270 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm14518-201ENSMUST00000117351 542 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm13210-201ENSMUST00000121483 273 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm15065-201ENSMUST00000121699 273 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm25278-201ENSMUST00000157267 120 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm26085-201ENSMUST00000157900 116 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm23053-201ENSMUST00000175136 96 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm21850-201ENSMUST00000179792 359 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm27568-201ENSMUST00000184220 99 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm27690-201ENSMUST00000184596 126 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm28848-201ENSMUST00000189984 168 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm37449-201ENSMUST00000193016 270 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm18658-201ENSMUST00000195558 270 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC4.43□□□□□ -1.7
Ubp1Q811S7 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm45553-201ENSMUST00000209929 507 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm45651-201ENSMUST00000210857 335 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm45499-201ENSMUST00000211656 280 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.43□□□□□ -1.7
Ubp1Q811S7 AC100209.2-201ENSMUST00000224461 451 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.43□□□□□ -1.7
Ubp1Q811S7 Gm22294-201ENSMUST00000083308 104 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 155.1 ms