Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm25283-201ENSMUST00000157272 77 ntBASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 Gm23716-201ENSMUST00000157348 144 ntBASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 Gm26622-201ENSMUST00000180520 298 ntBASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 Gm23970-201ENSMUST00000083319 107 ntBASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 Gm23650-201ENSMUST00000083355 70 ntBASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 Gm25512-201ENSMUST00000083863 107 ntBASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 Olfr895-201ENSMUST00000093864 951 ntBASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Pcdh9F8VPK8 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm381-201ENSMUST00000117443 2037 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm15988-201ENSMUST00000118677 367 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm15106-201ENSMUST00000119691 821 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm12276-201ENSMUST00000121709 301 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm26255-201ENSMUST00000122492 103 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm24720-201ENSMUST00000157518 166 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm25982-201ENSMUST00000157920 101 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm23411-201ENSMUST00000157988 62 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm25977-201ENSMUST00000158697 85 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm17148-201ENSMUST00000164702 249 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm20543-201ENSMUST00000174200 726 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm26195-201ENSMUST00000175035 101 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm8532-201ENSMUST00000179174 461 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm27905-201ENSMUST00000184005 207 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm28069-201ENSMUST00000189926 214 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm37743-201ENSMUST00000194645 376 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm43239-201ENSMUST00000200131 201 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm44870-201ENSMUST00000207291 357 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 AC163295.1-201ENSMUST00000227840 314 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm24045-201ENSMUST00000083113 98 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm24533-201ENSMUST00000083138 196 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm22974-201ENSMUST00000083301 103 ntBASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh9F8VPK8 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm23422-201ENSMUST00000102000 107 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Mir759-201ENSMUST00000103254 98 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm24890-201ENSMUST00000104389 102 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm14971-201ENSMUST00000117980 663 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm13717-201ENSMUST00000119868 365 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm11556-201ENSMUST00000120751 288 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm15167-201ENSMUST00000121997 187 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm23183-201ENSMUST00000122595 323 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm25621-201ENSMUST00000157223 114 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm24552-201ENSMUST00000158646 103 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Nron-204ENSMUST00000158971 370 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm25198-201ENSMUST00000178574 110 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm22367-201ENSMUST00000178930 132 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm19498-201ENSMUST00000191128 331 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm37428-201ENSMUST00000193886 137 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm44324-201ENSMUST00000198517 135 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm44084-201ENSMUST00000203947 409 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm44266-201ENSMUST00000205235 500 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm45252-201ENSMUST00000211579 397 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 AC160962.2-201ENSMUST00000224761 632 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm24623-201ENSMUST00000082616 194 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm23096-201ENSMUST00000083447 107 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.23□□□□□ -1.89
Pcdh9F8VPK8 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Pcdh9F8VPK8 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Pcdh9F8VPK8 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Pcdh9F8VPK8 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Pcdh9F8VPK8 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms