Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm44478-201ENSMUST00000204875 114 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm45232-201ENSMUST00000207811 162 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm45590-201ENSMUST00000209715 262 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 AC156795.1-201ENSMUST00000214655 414 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim3Q9R1R2 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm23503-201ENSMUST00000083903 107 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.56□□□□□ -2
Trim3Q9R1R2 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Trim3Q9R1R2 Gm25407-201ENSMUST00000104102 134 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trim3Q9R1R2 Gm14868-201ENSMUST00000117840 216 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 Gm14602-201ENSMUST00000118625 340 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 DQ267100-201ENSMUST00000122600 72 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 Gm16354-201ENSMUST00000155376 150 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Trim3Q9R1R2 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
Trim3Q9R1R2 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.55□□□□□ -2
Trim3Q9R1R2 Mir6916-201ENSMUST00000184514 63 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Trim3Q9R1R2 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 Gm17771-201ENSMUST00000194477 1147 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 Gm42665-201ENSMUST00000202100 586 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 Gm45395-201ENSMUST00000209891 559 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim3Q9R1R2 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.55□□□□□ -2
Trim3Q9R1R2 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trim3Q9R1R2 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.55□□□□□ -2
Trim3Q9R1R2 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trim3Q9R1R2 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.55□□□□□ -2
Trim3Q9R1R2 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim3Q9R1R2 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm11352-201ENSMUST00000119264 517 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm12617-201ENSMUST00000121268 381 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm13356-201ENSMUST00000121678 335 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm25294-201ENSMUST00000122791 104 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm24475-201ENSMUST00000157435 143 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm22651-201ENSMUST00000157872 94 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm26041-201ENSMUST00000158148 108 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm24879-201ENSMUST00000158386 143 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm24681-201ENSMUST00000158760 107 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm17065-201ENSMUST00000165245 239 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm5224-201ENSMUST00000183060 350 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm27505-201ENSMUST00000185071 110 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm29550-201ENSMUST00000185543 285 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm28744-201ENSMUST00000189939 340 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm38154-201ENSMUST00000195444 340 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm44526-201ENSMUST00000204664 121 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm18160-201ENSMUST00000214279 827 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.54□□□□□ -2
Trim3Q9R1R2 AC154484.1-201ENSMUST00000227311 771 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim3Q9R1R2 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trim3Q9R1R2 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm23723-201ENSMUST00000082996 132 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm23650-201ENSMUST00000083355 70 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm5670-201ENSMUST00000093546 372 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim3Q9R1R2 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trim3Q9R1R2 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.54□□□□□ -2
Trim3Q9R1R2 Gm23744-201ENSMUST00000104231 149 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm12814-201ENSMUST00000117091 846 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm11285-201ENSMUST00000118443 322 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm14843-201ENSMUST00000119596 212 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm23867-201ENSMUST00000122649 274 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm22985-201ENSMUST00000122754 116 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm22452-201ENSMUST00000122804 104 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trim3Q9R1R2 Snord53-201ENSMUST00000175146 78 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm24813-201ENSMUST00000175310 84 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm23268-201ENSMUST00000175494 78 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm22716-201ENSMUST00000177596 107 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Mir7242-201ENSMUST00000183710 79 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Mir6371-201ENSMUST00000184470 111 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.53□□□□□ -2
Trim3Q9R1R2 Gm28779-201ENSMUST00000189678 323 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 177.1 ms