Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Nkd1Q99MH6 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm23142-201ENSMUST00000101848 105 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm26240-201ENSMUST00000101893 105 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm14810-201ENSMUST00000121628 486 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm7618-201ENSMUST00000121643 171 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm25177-201ENSMUST00000122634 117 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm25456-201ENSMUST00000157952 109 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm17187-201ENSMUST00000164622 410 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm19898-201ENSMUST00000177490 251 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Mir6346-201ENSMUST00000183982 81 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Mir6391-201ENSMUST00000184391 104 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm28650-201ENSMUST00000188413 411 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm37670-201ENSMUST00000193622 229 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Trbv11-201ENSMUST00000194354 260 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm43914-201ENSMUST00000203592 594 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm45513-201ENSMUST00000210228 376 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm45616-201ENSMUST00000211711 319 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 AC239878.2-201ENSMUST00000224048 464 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 AC167140.1-201ENSMUST00000224710 403 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm26066-201ENSMUST00000083385 109 ntBASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Nkd1Q99MH6 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm650-201ENSMUST00000144428 1551 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm23941-201ENSMUST00000101953 107 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm14816-201ENSMUST00000117174 294 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm15936-201ENSMUST00000118706 460 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Mir3104-201ENSMUST00000174911 63 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm24086-201ENSMUST00000175171 98 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm9830-201ENSMUST00000178509 357 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Mir6938-201ENSMUST00000184173 63 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm27414-201ENSMUST00000185033 381 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm43402-201ENSMUST00000197159 159 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm44881-201ENSMUST00000205425 367 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm44520-201ENSMUST00000205447 802 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 AC154552.1-201ENSMUST00000222969 202 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm9818-201ENSMUST00000050900 255 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Snord21-201ENSMUST00000082519 94 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Mir34b-201ENSMUST00000083558 84 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Nkd1Q99MH6 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.71□□□□□ -1.81
Nkd1Q99MH6 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
Nkd1Q99MH6 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Nkd1Q99MH6 Gm24125-201ENSMUST00000104105 137 ntBASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Snora64-201ENSMUST00000104521 134 ntBASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm14551-201ENSMUST00000120802 256 ntBASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm24959-201ENSMUST00000157924 146 ntBASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm16303-201ENSMUST00000161498 390 ntBASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Mir6899-201ENSMUST00000184798 64 ntBASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm20257-202ENSMUST00000188643 130 ntBASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm17887-201ENSMUST00000200194 547 ntBASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm44844-201ENSMUST00000207242 336 ntBASIC3.71□□□□□ -1.82
Nkd1Q99MH6 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
Nkd1Q99MH6 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nkd1Q99MH6 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 219 ms