Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm21978-201ENSMUST00000179696 377 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm28008-201ENSMUST00000184021 186 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Mir6413-201ENSMUST00000184049 108 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm43115-201ENSMUST00000196244 160 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm44324-201ENSMUST00000198517 135 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 AC132437.1-201ENSMUST00000218308 320 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 AC167229.1-201ENSMUST00000220057 469 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 AC154506.1-201ENSMUST00000225178 621 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Olfr575-201ENSMUST00000084812 957 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm10343-201ENSMUST00000096279 348 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Gm6325-201ENSMUST00000122015 3114 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Gm14581-201ENSMUST00000121726 198 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Gm22038-201ENSMUST00000157277 242 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Gm22216-201ENSMUST00000157557 114 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Gm26041-201ENSMUST00000158148 108 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Gm24930-201ENSMUST00000158315 83 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Gm37431-201ENSMUST00000195102 111 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 AC122905.2-201ENSMUST00000220325 269 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Gm25929-201ENSMUST00000082784 107 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Brf1Q8CFK2 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.05□□□□□ -1.76
Brf1Q8CFK2 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm25272-201ENSMUST00000104293 128 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm24374-201ENSMUST00000104394 106 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm22496-201ENSMUST00000104493 88 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Mir294-201ENSMUST00000104710 84 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm14897-201ENSMUST00000118213 207 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm13873-201ENSMUST00000119208 427 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm15760-201ENSMUST00000119553 283 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm26028-201ENSMUST00000158660 294 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm8207-201ENSMUST00000171204 502 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm25175-201ENSMUST00000178712 79 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm43039-201ENSMUST00000202883 963 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm19726-201ENSMUST00000205008 240 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm45814-201ENSMUST00000212646 775 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm7692-201ENSMUST00000213534 409 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 AC117588.2-201ENSMUST00000228340 311 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Brf1Q8CFK2 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Gm37642-201ENSMUST00000193166 1735 ntBASIC4.04□□□□□ -1.76
Brf1Q8CFK2 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Gm14287-201ENSMUST00000121060 117 ntBASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Gm22718-201ENSMUST00000122701 315 ntBASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Gm25977-201ENSMUST00000158697 85 ntBASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Gm25284-201ENSMUST00000180345 141 ntBASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Gm18486-201ENSMUST00000184040 298 ntBASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Mir8106-201ENSMUST00000184520 139 ntBASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Gm44825-201ENSMUST00000207557 150 ntBASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Gm44598-201ENSMUST00000207566 150 ntBASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Gm10242-201ENSMUST00000090064 330 ntBASIC4.03□□□□□ -1.76
Brf1Q8CFK2 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 201.1 ms