Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm27308-201ENSMUST00000184807 233 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 Ighv12-2-201ENSMUST00000191949 362 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 Gm44322-201ENSMUST00000196830 115 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Ubp1Q811S7 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Ubp1Q811S7 Gm35702-201ENSMUST00000198653 511 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 Igkv1-136-201ENSMUST00000200635 297 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 Gm44543-201ENSMUST00000209136 396 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 Gm45859-201ENSMUST00000212794 214 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 Gm9616-201ENSMUST00000221154 781 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ubp1Q811S7 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ubp1Q811S7 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ubp1Q811S7 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ubp1Q811S7 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ubp1Q811S7 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ubp1Q811S7 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC4.49□□□□□ -1.69
Ubp1Q811S7 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ubp1Q811S7 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ubp1Q811S7 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm23705-201ENSMUST00000104370 130 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm23841-201ENSMUST00000116951 114 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm12721-201ENSMUST00000120621 268 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm13232-201ENSMUST00000121816 632 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.48□□□□□ -1.69
Ubp1Q811S7 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm24402-201ENSMUST00000157873 91 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm26287-201ENSMUST00000158887 81 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm20542-201ENSMUST00000174582 372 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm25534-201ENSMUST00000175365 125 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm6660-201ENSMUST00000179149 468 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Mir6371-201ENSMUST00000184470 111 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm29140-201ENSMUST00000190187 476 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm37636-201ENSMUST00000193583 359 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm18429-201ENSMUST00000198707 421 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm44259-201ENSMUST00000204996 298 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ubp1Q811S7 CT954323.1-201ENSMUST00000222774 229 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Gm22620-201ENSMUST00000082700 133 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Ubp1Q811S7 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ubp1Q811S7 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
Ubp1Q811S7 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ubp1Q811S7 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.48□□□□□ -1.69
Ubp1Q811S7 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
Ubp1Q811S7 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ubp1Q811S7 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ubp1Q811S7 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm14714-201ENSMUST00000119743 439 ntBASIC4.47□□□□□ -1.69
Ubp1Q811S7 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm25392-201ENSMUST00000157335 297 ntBASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm22225-201ENSMUST00000157358 278 ntBASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm23496-201ENSMUST00000157741 248 ntBASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm27445-201ENSMUST00000184484 72 ntBASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm19123-201ENSMUST00000190716 651 ntBASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm44337-201ENSMUST00000196553 114 ntBASIC4.47□□□□□ -1.69
Ubp1Q811S7 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm6051-201ENSMUST00000201529 352 ntBASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.47□□□□□ -1.69
Ubp1Q811S7 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ubp1Q811S7 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.47□□□□□ -1.69
Ubp1Q811S7 Gm24152-201ENSMUST00000082764 163 ntBASIC4.47□□□□□ -1.69
Ubp1Q811S7 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.47□□□□□ -1.69
Ubp1Q811S7 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
Ubp1Q811S7 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ubp1Q811S7 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.47□□□□□ -1.69
Ubp1Q811S7 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
Ubp1Q811S7 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
Ubp1Q811S7 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.46□□□□□ -1.69
Ubp1Q811S7 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.46□□□□□ -1.69
Ubp1Q811S7 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.46□□□□□ -1.69
Ubp1Q811S7 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
Ubp1Q811S7 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Ubp1Q811S7 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ubp1Q811S7 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ubp1Q811S7 Mir676-201ENSMUST00000102443 89 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm22473-201ENSMUST00000104114 132 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm15553-201ENSMUST00000118757 430 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm15162-201ENSMUST00000119325 283 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm14303-201ENSMUST00000121320 171 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm14770-201ENSMUST00000122197 312 ntBASIC4.46□□□□□ -1.7
Ubp1Q811S7 Gm22984-201ENSMUST00000122751 122 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 136.3 ms