Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm34701-202ENSMUST00000204685 360 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm26055-201ENSMUST00000083038 107 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Gm23645-201ENSMUST00000083228 108 ntBASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trim3Q9R1R2 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
Trim3Q9R1R2 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.59□□□□□ -2
Trim3Q9R1R2 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Trim3Q9R1R2 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trim3Q9R1R2 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Gm12156-201ENSMUST00000119188 554 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Gm7209-201ENSMUST00000122339 333 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Gm12238-201ENSMUST00000127764 124 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.58□□□□□ -2
Trim3Q9R1R2 Gm23599-201ENSMUST00000157261 251 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Gm23025-201ENSMUST00000158769 111 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.58□□□□□ -2
Trim3Q9R1R2 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Mir6338-201ENSMUST00000183389 109 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Gm28282-201ENSMUST00000186072 186 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Gm36966-201ENSMUST00000192217 413 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Gm45288-201ENSMUST00000210236 151 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.58□□□□□ -2
Trim3Q9R1R2 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trim3Q9R1R2 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trim3Q9R1R2 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.58□□□□□ -2
Trim3Q9R1R2 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trim3Q9R1R2 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trim3Q9R1R2 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trim3Q9R1R2 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim3Q9R1R2 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm22591-201ENSMUST00000104243 106 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm15272-201ENSMUST00000120865 233 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm22755-201ENSMUST00000157143 100 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm24443-201ENSMUST00000157242 132 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm22849-201ENSMUST00000157713 307 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm24959-201ENSMUST00000157924 146 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm3111-201ENSMUST00000167426 490 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm23190-201ENSMUST00000180307 64 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm28283-201ENSMUST00000185509 178 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm28163-201ENSMUST00000187099 325 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm28474-201ENSMUST00000188501 315 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm44295-201ENSMUST00000203805 437 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm9174-201ENSMUST00000078149 255 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm26206-201ENSMUST00000082908 110 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm24490-201ENSMUST00000083803 98 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Trim3Q9R1R2 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trim3Q9R1R2 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trim3Q9R1R2 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Trim3Q9R1R2 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.57□□□□□ -2
Trim3Q9R1R2 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trim3Q9R1R2 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trim3Q9R1R2 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trim3Q9R1R2 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm25376-201ENSMUST00000104340 133 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm12787-201ENSMUST00000119234 396 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm11384-201ENSMUST00000121376 303 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm13406-201ENSMUST00000121991 256 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm25280-201ENSMUST00000157269 101 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm24958-201ENSMUST00000158009 97 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm22330-201ENSMUST00000158068 115 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trim3Q9R1R2 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm26195-201ENSMUST00000175035 101 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Gm36984-201ENSMUST00000192770 235 ntBASIC2.56□□□□□ -2
Trim3Q9R1R2 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 157.6 ms