Protein–RNA interactions for Protein: Q9CZA6

Nde1, Nuclear distribution protein nudE homolog 1, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1Q9CZA6 Gm12814-201ENSMUST00000117091 846 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm15106-201ENSMUST00000119691 821 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm13913-201ENSMUST00000121126 260 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm14389-201ENSMUST00000140453 241 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm22560-201ENSMUST00000157332 120 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm25476-201ENSMUST00000175125 185 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm26991-201ENSMUST00000180950 620 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Mir6382-201ENSMUST00000184055 110 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Mir6372-201ENSMUST00000185114 109 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm37727-201ENSMUST00000191637 819 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm37692-201ENSMUST00000192633 232 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.54□□□□□ -2
Nde1Q9CZA6 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm19457-201ENSMUST00000200995 448 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm44118-201ENSMUST00000204665 229 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm44824-201ENSMUST00000207021 229 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm20304-201ENSMUST00000218168 444 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm46994-201ENSMUST00000221523 219 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm5955-201ENSMUST00000222712 219 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm7984-201ENSMUST00000060640 538 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Nde1Q9CZA6 Mir19a-201ENSMUST00000083482 82 ntBASIC2.54□□□□□ -2
Nde1Q9CZA6 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.54□□□□□ -2
Nde1Q9CZA6 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.54□□□□□ -2
Nde1Q9CZA6 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm11460-201ENSMUST00000118200 361 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm6071-201ENSMUST00000119561 440 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm25391-201ENSMUST00000157342 134 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm24534-201ENSMUST00000157949 291 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm24393-201ENSMUST00000158135 97 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm25365-201ENSMUST00000158852 121 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.53□□□□□ -2
Nde1Q9CZA6 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Mir7j-201ENSMUST00000184427 122 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm18185-201ENSMUST00000186725 667 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm28779-201ENSMUST00000189678 323 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm28744-201ENSMUST00000189939 340 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm28314-201ENSMUST00000191276 345 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm37807-201ENSMUST00000194310 190 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.53□□□□□ -2
Nde1Q9CZA6 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm43026-201ENSMUST00000202972 325 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm45232-201ENSMUST00000207811 162 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm45445-201ENSMUST00000209586 232 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Nde1Q9CZA6 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Nde1Q9CZA6 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.53□□□□□ -2
Nde1Q9CZA6 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 DQ267100-201ENSMUST00000122600 72 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm23538-201ENSMUST00000157535 101 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm24959-201ENSMUST00000157924 146 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm22947-201ENSMUST00000158559 91 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm24551-201ENSMUST00000158645 92 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm24681-201ENSMUST00000158760 107 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm24100-201ENSMUST00000178592 79 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm24137-201ENSMUST00000180055 79 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm23190-201ENSMUST00000180307 64 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm22391-201ENSMUST00000180356 79 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm32340-201ENSMUST00000192883 259 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm43722-201ENSMUST00000196054 124 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm44594-201ENSMUST00000208982 407 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm18160-201ENSMUST00000214279 827 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 AL772265.1-201ENSMUST00000214379 305 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm23723-201ENSMUST00000082996 132 ntBASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
Nde1Q9CZA6 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 141.5 ms