Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm26147-201ENSMUST00000104479 114 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm13122-201ENSMUST00000118380 453 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm15231-201ENSMUST00000119174 447 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm14883-201ENSMUST00000120179 157 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm14972-201ENSMUST00000121780 364 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm24008-201ENSMUST00000157733 138 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm24409-201ENSMUST00000157881 152 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm22101-201ENSMUST00000157928 103 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm25519-201ENSMUST00000158392 127 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm22945-201ENSMUST00000158557 157 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm23415-201ENSMUST00000175519 83 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm4761-201ENSMUST00000178086 582 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm29350-201ENSMUST00000189141 541 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm9379-201ENSMUST00000196790 646 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm44336-201ENSMUST00000203696 468 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm18540-201ENSMUST00000204025 526 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm44989-201ENSMUST00000204749 217 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm6012-201ENSMUST00000210821 730 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Gm23925-201ENSMUST00000082471 132 ntBASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Brf1Q8CFK2 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Brf1Q8CFK2 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Brf1Q8CFK2 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Brf1Q8CFK2 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Brf1Q8CFK2 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Mir92b-201ENSMUST00000102300 83 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm7164-201ENSMUST00000117503 450 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm25835-201ENSMUST00000158917 144 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Nron-204ENSMUST00000158971 370 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm24819-201ENSMUST00000175094 166 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm20673-201ENSMUST00000177167 430 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm24168-201ENSMUST00000178825 107 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm23862-201ENSMUST00000180342 94 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm9022-202ENSMUST00000183285 483 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm29064-201ENSMUST00000187014 813 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm29192-201ENSMUST00000190942 377 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm44654-201ENSMUST00000208052 329 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Gm10161-201ENSMUST00000091506 204 ntBASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Brf1Q8CFK2 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Gm15147-201ENSMUST00000122263 483 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Gm25283-201ENSMUST00000157272 77 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Brf1Q8CFK2 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Gm6059-201ENSMUST00000196903 340 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Gm42621-201ENSMUST00000198114 275 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Gm42594-201ENSMUST00000199511 246 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Mir691-201ENSMUST00000199719 78 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Gm45730-201ENSMUST00000212560 395 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.07□□□□□ -1.76
Brf1Q8CFK2 AC125311.1-201ENSMUST00000226950 220 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Olfr197-201ENSMUST00000080031 926 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Gm24147-201ENSMUST00000082763 144 ntBASIC4.07□□□□□ -1.76
Brf1Q8CFK2 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm25111-201ENSMUST00000116686 147 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm13076-201ENSMUST00000118041 204 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm12191-201ENSMUST00000118307 348 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm12803-201ENSMUST00000118907 821 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm9703-201ENSMUST00000119573 343 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm11785-201ENSMUST00000120165 601 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm14578-201ENSMUST00000122166 391 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm25341-201ENSMUST00000157461 268 ntBASIC4.06□□□□□ -1.76
Brf1Q8CFK2 Gm24499-201ENSMUST00000158446 104 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 153.1 ms