Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm45316-201ENSMUST00000210128 162 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm45273-201ENSMUST00000211559 281 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm24490-201ENSMUST00000083803 98 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm25213-201ENSMUST00000102388 113 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Mir667-201ENSMUST00000102441 92 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm24122-201ENSMUST00000104107 132 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm22486-201ENSMUST00000116815 137 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm13756-201ENSMUST00000117618 222 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm13454-201ENSMUST00000118166 483 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm12891-201ENSMUST00000119358 240 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm11357-201ENSMUST00000119758 954 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm14785-201ENSMUST00000120185 539 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm15177-201ENSMUST00000120491 577 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm12006-201ENSMUST00000120786 403 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.04□□□□□ -1.92
Trim58Q5NCC9 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm9593-201ENSMUST00000166034 469 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm26177-201ENSMUST00000178683 107 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm28282-201ENSMUST00000186072 186 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm29641-201ENSMUST00000188955 259 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm37727-201ENSMUST00000191637 819 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm37817-201ENSMUST00000195276 434 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm24611-201ENSMUST00000083272 107 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Mir465c-1-201ENSMUST00000093560 81 ntBASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Trim58Q5NCC9 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Trim58Q5NCC9 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Gm22752-201ENSMUST00000102083 109 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Gm24430-201ENSMUST00000104077 104 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Gm23747-201ENSMUST00000104228 131 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Gm12225-201ENSMUST00000117995 298 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Gm24691-201ENSMUST00000157762 140 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Gm17065-201ENSMUST00000165245 239 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Gm29107-201ENSMUST00000190910 347 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.03□□□□□ -1.92
Trim58Q5NCC9 AL935138.1-201ENSMUST00000215309 196 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 AC110380.1-201ENSMUST00000226987 389 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trim58Q5NCC9 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.03□□□□□ -1.92
Trim58Q5NCC9 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm2066-201ENSMUST00000118046 389 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm14793-201ENSMUST00000118739 311 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm14627-201ENSMUST00000118931 567 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm11819-201ENSMUST00000122192 372 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 n-R5s207-201ENSMUST00000122497 118 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm25270-201ENSMUST00000122606 138 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm24771-201ENSMUST00000158508 137 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm23568-201ENSMUST00000177960 92 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm24829-201ENSMUST00000179245 92 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm23379-201ENSMUST00000180026 107 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trim58Q5NCC9 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm31123-201ENSMUST00000192094 666 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.02□□□□□ -1.93
Trim58Q5NCC9 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.02□□□□□ -1.93
Trim58Q5NCC9 AC112972.1-201ENSMUST00000227329 365 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 305.2 ms