Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm43899-201ENSMUST00000203675 246 ntBASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 Gm21007-201ENSMUST00000221024 326 ntBASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 Gm26055-201ENSMUST00000083038 107 ntBASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 Mir101b-201ENSMUST00000083622 97 ntBASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 Gm23741-201ENSMUST00000097237 171 ntBASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Pcdh9F8VPK8 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Pcdh9F8VPK8 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Pcdh9F8VPK8 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm14355-201ENSMUST00000117352 264 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Mup-ps22-201ENSMUST00000121611 243 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm24936-201ENSMUST00000122598 247 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm25292-201ENSMUST00000122797 322 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm14333-201ENSMUST00000130484 264 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm25624-201ENSMUST00000157222 275 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm25519-201ENSMUST00000158392 127 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm22532-201ENSMUST00000158822 140 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Mir5129-201ENSMUST00000174938 78 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 AC117656.1-201ENSMUST00000225826 339 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm8074-201ENSMUST00000095071 252 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Pcdh9F8VPK8 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm25272-201ENSMUST00000104293 128 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm13046-201ENSMUST00000117391 501 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm14307-201ENSMUST00000118930 291 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm14736-201ENSMUST00000121470 336 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm15147-201ENSMUST00000122263 483 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm14297-201ENSMUST00000129110 291 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm24008-201ENSMUST00000157733 138 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm23068-201ENSMUST00000158239 293 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm22136-201ENSMUST00000158751 268 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm27385-201ENSMUST00000184747 104 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm32340-201ENSMUST00000192883 259 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm37523-201ENSMUST00000194901 412 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm33354-201ENSMUST00000195448 906 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm45101-201ENSMUST00000208327 232 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm23925-201ENSMUST00000082471 132 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Pcdh9F8VPK8 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm12149-201ENSMUST00000117511 654 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm15175-201ENSMUST00000117629 132 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm14987-201ENSMUST00000117820 676 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm11582-201ENSMUST00000121041 236 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm15379-201ENSMUST00000121224 648 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm22561-201ENSMUST00000157331 84 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm24192-201ENSMUST00000157978 145 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm24546-201ENSMUST00000158652 102 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm23024-201ENSMUST00000158770 292 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm25835-201ENSMUST00000158917 144 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm4761-201ENSMUST00000178086 582 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm24518-201ENSMUST00000180275 94 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm27490-201ENSMUST00000184754 128 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Mir6372-201ENSMUST00000185114 109 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm28506-201ENSMUST00000189937 150 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm18956-201ENSMUST00000192857 480 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm43415-201ENSMUST00000201934 750 ntBASIC3.31□□□□□ -1.88
Pcdh9F8VPK8 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms