Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm25088-201ENSMUST00000101803 79 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm14020-201ENSMUST00000118165 662 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm13349-201ENSMUST00000118436 411 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm11598-201ENSMUST00000119257 357 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm14240-201ENSMUST00000120353 546 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm12368-201ENSMUST00000122251 434 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm22718-201ENSMUST00000122701 315 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm24019-201ENSMUST00000178620 107 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm26243-201ENSMUST00000179260 107 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm27330-201ENSMUST00000184689 132 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.63□□□□□ -1.99
Trim3Q9R1R2 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Trim3Q9R1R2 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm19147-201ENSMUST00000199622 652 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm15235-201ENSMUST00000200572 194 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm43232-201ENSMUST00000201346 364 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm44282-201ENSMUST00000203199 190 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm45438-201ENSMUST00000210242 564 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm23296-201ENSMUST00000082555 107 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm24859-201ENSMUST00000082729 107 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Mir19a-201ENSMUST00000083482 82 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Trim3Q9R1R2 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trim3Q9R1R2 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.63□□□□□ -1.99
Trim3Q9R1R2 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm25168-201ENSMUST00000104189 132 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm25563-201ENSMUST00000104603 74 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm14448-201ENSMUST00000116383 210 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm22486-201ENSMUST00000116815 137 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm11813-201ENSMUST00000118586 291 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm15936-201ENSMUST00000118706 460 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm14292-201ENSMUST00000118761 456 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm15112-201ENSMUST00000120152 860 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm14867-201ENSMUST00000120156 866 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm12045-201ENSMUST00000122122 573 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm26101-201ENSMUST00000157246 105 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm26215-201ENSMUST00000158584 139 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm17064-201ENSMUST00000167690 452 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm23402-201ENSMUST00000178130 107 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm21726-201ENSMUST00000179654 392 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm24137-201ENSMUST00000180055 79 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm22391-201ENSMUST00000180356 79 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Mir6353-201ENSMUST00000183596 113 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Mir6382-201ENSMUST00000184055 110 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm27520-201ENSMUST00000184872 81 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm45658-201ENSMUST00000209197 580 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Trim3Q9R1R2 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm6030-201ENSMUST00000078768 402 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm22249-201ENSMUST00000082485 136 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 Gm25199-201ENSMUST00000083095 104 ntBASIC2.62□□□□□ -1.99
Trim3Q9R1R2 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Trim3Q9R1R2 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm26341-201ENSMUST00000104561 134 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm14899-201ENSMUST00000118673 548 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm14940-201ENSMUST00000119309 495 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm13482-201ENSMUST00000119842 254 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm12825-201ENSMUST00000120249 563 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm12044-201ENSMUST00000120335 213 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm16021-201ENSMUST00000121176 219 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm22236-201ENSMUST00000157093 106 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm24876-201ENSMUST00000158780 92 ntBASIC2.61□□□□□ -1.99
Trim3Q9R1R2 Gm25365-201ENSMUST00000158852 121 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 208.4 ms