Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm16363-201ENSMUST00000132460 877 ntBASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Gm24393-201ENSMUST00000158135 97 ntBASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Gm21809-201ENSMUST00000178495 468 ntBASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Gm7897-201ENSMUST00000193981 554 ntBASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Gm43004-201ENSMUST00000201872 703 ntBASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 CT025525.3-201ENSMUST00000228858 366 ntBASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Gm23447-201ENSMUST00000082798 163 ntBASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Mir465-201ENSMUST00000093563 74 ntBASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Col4a4Q9QZR9 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm7123-201ENSMUST00000117647 213 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm12889-201ENSMUST00000118684 241 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm16053-201ENSMUST00000120511 188 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm11344-201ENSMUST00000122011 335 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm28384-201ENSMUST00000189079 463 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm37987-201ENSMUST00000194999 825 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm37817-201ENSMUST00000195276 434 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm43406-201ENSMUST00000200356 334 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm44266-201ENSMUST00000205235 500 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm44857-201ENSMUST00000208331 196 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 AC120394.1-201ENSMUST00000217153 351 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm30738-201ENSMUST00000221346 502 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm22683-201ENSMUST00000082854 137 ntBASIC2.09□□□□□ -2.08
Col4a4Q9QZR9 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm14932-201ENSMUST00000117112 453 ntBASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm22554-201ENSMUST00000157798 147 ntBASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm23342-201ENSMUST00000158958 115 ntBASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm2092-201ENSMUST00000178887 639 ntBASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm2759-201ENSMUST00000179938 639 ntBASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm24969-201ENSMUST00000180331 79 ntBASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Col4a4Q9QZR9 Gm25274-201ENSMUST00000104296 135 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm16412-201ENSMUST00000121602 273 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm25981-201ENSMUST00000157921 295 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm24857-201ENSMUST00000158061 310 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm10177-202ENSMUST00000161698 207 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Mir5136-201ENSMUST00000175573 76 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm20689-201ENSMUST00000176033 279 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm23267-201ENSMUST00000178490 132 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm25598-201ENSMUST00000179031 107 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm27608-201ENSMUST00000184822 162 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm43979-201ENSMUST00000203179 475 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm45192-201ENSMUST00000206749 283 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm44533-201ENSMUST00000207782 268 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 CT009733.1-201ENSMUST00000225322 425 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm23975-201ENSMUST00000082685 106 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col4a4Q9QZR9 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Col4a4Q9QZR9 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 129.1 ms