Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm24987-201ENSMUST00000104453 134 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm14622-201ENSMUST00000117117 468 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm14537-201ENSMUST00000117464 599 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm11693-201ENSMUST00000119625 565 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm22791-201ENSMUST00000157232 145 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm26187-201ENSMUST00000157693 101 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Mir5127-201ENSMUST00000175295 71 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm7909-201ENSMUST00000182688 614 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Mir6907-201ENSMUST00000183764 71 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm29229-201ENSMUST00000188874 323 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm44472-201ENSMUST00000204922 943 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm35405-201ENSMUST00000218754 400 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm23650-201ENSMUST00000083355 70 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Mir452-201ENSMUST00000093629 85 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Brf1Q8CFK2 Gm18360-201ENSMUST00000173327 1524 ntBASIC4.15□□□□□ -1.75
Brf1Q8CFK2 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Gm13167-201ENSMUST00000118554 578 ntBASIC4.14□□□□□ -1.75
Brf1Q8CFK2 AA413626-201ENSMUST00000121125 494 ntBASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Gm23671-201ENSMUST00000157472 103 ntBASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Gm27733-201ENSMUST00000184803 68 ntBASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Gm28579-201ENSMUST00000186143 369 ntBASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Snord42a-201ENSMUST00000082606 65 ntBASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Mir101b-201ENSMUST00000083622 97 ntBASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Brf1Q8CFK2 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm23532-201ENSMUST00000104569 112 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm9059-201ENSMUST00000118319 183 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm15988-201ENSMUST00000118677 367 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm9078-201ENSMUST00000119126 617 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm12294-201ENSMUST00000119723 490 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm15142-201ENSMUST00000121013 856 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm14980-201ENSMUST00000121247 736 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm13868-201ENSMUST00000122411 294 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm24534-201ENSMUST00000157949 291 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm17162-201ENSMUST00000168538 473 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Mir5129-201ENSMUST00000174938 78 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm22910-201ENSMUST00000178568 132 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm23793-201ENSMUST00000179396 117 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm26180-201ENSMUST00000179942 107 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm28339-201ENSMUST00000185845 696 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm29062-201ENSMUST00000186032 694 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm28057-201ENSMUST00000186603 615 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm28896-201ENSMUST00000188609 696 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm29330-201ENSMUST00000190032 699 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm28500-201ENSMUST00000190286 151 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm17966-201ENSMUST00000193453 594 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm38107-201ENSMUST00000194873 696 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm45080-201ENSMUST00000206648 283 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm44927-201ENSMUST00000207573 716 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm26446-201ENSMUST00000082455 103 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm22577-201ENSMUST00000083731 109 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm37761-201ENSMUST00000194989 2098 ntBASIC4.13□□□□□ -1.75
Brf1Q8CFK2 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 146.6 ms