Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 AC127578.1-201ENSMUST00000227289 93 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
Trim58Q5NCC9 Mir1193-201ENSMUST00000116761 121 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm26473-201ENSMUST00000116763 127 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm13329-201ENSMUST00000117063 265 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm14841-201ENSMUST00000121067 758 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm12617-201ENSMUST00000121268 381 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm24836-201ENSMUST00000122609 108 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm22236-201ENSMUST00000157093 106 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm26041-201ENSMUST00000158148 108 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm22765-201ENSMUST00000158371 128 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm18396-201ENSMUST00000177095 361 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm22584-201ENSMUST00000177935 92 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim58Q5NCC9 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm43407-201ENSMUST00000199816 317 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm44161-201ENSMUST00000203532 253 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm35931-201ENSMUST00000203931 448 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm45380-201ENSMUST00000210465 315 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm45452-201ENSMUST00000210905 177 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 AC156560.1-201ENSMUST00000221425 256 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trim58Q5NCC9 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Olfr895-201ENSMUST00000093864 951 ntBASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim58Q5NCC9 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim58Q5NCC9 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm24951-201ENSMUST00000102182 109 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm14815-201ENSMUST00000120060 488 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm25945-201ENSMUST00000122484 135 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm25341-201ENSMUST00000157461 268 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm29754-201ENSMUST00000206269 358 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Trim58Q5NCC9 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm31849-201ENSMUST00000220306 375 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm25792-201ENSMUST00000083289 100 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm23733-201ENSMUST00000083750 106 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm25628-201ENSMUST00000084002 105 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
Trim58Q5NCC9 AC134917.1-201ENSMUST00000220517 1449 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.07□□□□□ -1.92
Trim58Q5NCC9 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim58Q5NCC9 Gm11367-201ENSMUST00000117802 120 ntBASIC3.06□□□□□ -1.92
Trim58Q5NCC9 Gm24475-201ENSMUST00000157435 143 ntBASIC3.06□□□□□ -1.92
Trim58Q5NCC9 Gm22390-201ENSMUST00000157588 325 ntBASIC3.06□□□□□ -1.92
Trim58Q5NCC9 Gm22733-201ENSMUST00000158094 91 ntBASIC3.06□□□□□ -1.92
Trim58Q5NCC9 Gm23312-201ENSMUST00000158774 102 ntBASIC3.06□□□□□ -1.92
Trim58Q5NCC9 Gm20660-201ENSMUST00000177515 289 ntBASIC3.06□□□□□ -1.92
Trim58Q5NCC9 Gm29335-201ENSMUST00000188361 459 ntBASIC3.06□□□□□ -1.92
Trim58Q5NCC9 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trim58Q5NCC9 Gm46194-201ENSMUST00000218136 320 ntBASIC3.06□□□□□ -1.92
Trim58Q5NCC9 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.06□□□□□ -1.92
Trim58Q5NCC9 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.06□□□□□ -1.92
Trim58Q5NCC9 Gm22622-201ENSMUST00000082870 129 ntBASIC3.06□□□□□ -1.92
Trim58Q5NCC9 Gm23503-201ENSMUST00000083903 107 ntBASIC3.06□□□□□ -1.92
Trim58Q5NCC9 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trim58Q5NCC9 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm15113-201ENSMUST00000119280 836 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm11438-201ENSMUST00000121582 189 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm12443-201ENSMUST00000122308 323 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm22521-201ENSMUST00000158272 134 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm24922-201ENSMUST00000158511 102 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm24551-201ENSMUST00000158645 92 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm25451-201ENSMUST00000177832 121 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm24968-201ENSMUST00000179817 107 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm7909-201ENSMUST00000182688 614 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Gm29365-201ENSMUST00000189461 699 ntBASIC3.05□□□□□ -1.92
Trim58Q5NCC9 Trbv22-201ENSMUST00000191697 291 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 459.5 ms