Protein–RNA interactions for Protein: P53947

YNL058C, Vacuolar membrane protein YNL058C, yeastyeast

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL058CP53947 YLR149C-AYLR149C-A 87 nt-0.47□□□□□ -2.48
YNL058CP53947 snR77snR77 88 nt-0.49□□□□□ -2.49
YNL058CP53947 CDC65tQ(CUG)M 72 nt-0.69□□□□□ -2.52
YNL058CP53947 snR33snR33 183 nt-0.7□□□□□ -2.52
YNL058CP53947 YHL009W-BYHL009W-B 5409 nt-0.74□□□□□ -2.53
YNL058CP53947 tP(UGG)QtP(UGG)Q 72 nt-0.77□□□□□ -2.53
YNL058CP53947 tT(UGU)G1tT(UGU)G1 72 nt-0.81□□□□□ -2.54
YNL058CP53947 tT(UGU)G2tT(UGU)G2 72 nt-0.81□□□□□ -2.54
YNL058CP53947 tT(UGU)PtT(UGU)P 72 nt-0.81□□□□□ -2.54
YNL058CP53947 YKL096C-BYKL096C-B 150 nt-0.81□□□□□ -2.54
YNL058CP53947 snR6snR6 112 nt-0.84□□□□□ -2.54
YNL058CP53947 YOR335W-AYOR335W-A 81 nt-0.85□□□□□ -2.55
YNL058CP53947 YMR315W-AYMR315W-A 108 nt-0.86□□□□□ -2.55
YNL058CP53947 snR73snR73 106 nt-1.03□□□□□ -2.57
YNL058CP53947 YBR223W-AYBR223W-A 120 nt-1.06□□□□□ -2.58
YNL058CP53947 YOR309CYOR309C 381 nt-1.09□□□□□ -2.58
YNL058CP53947 RPL41BYDL133C-A 78 nt-1.13□□□□□ -2.59
YNL058CP53947 snR40snR40 97 nt-1.13□□□□□ -2.59
YNL058CP53947 snR75snR75 89 nt-1.2□□□□□ -2.6
YNL058CP53947 YNR077CYNR077C 255 nt-1.23□□□□□ -2.61
YNL058CP53947 tY(GUA)QtY(GUA)Q 84 nt-1.32□□□□□ -2.62
YNL058CP53947 snR58snR58 96 nt-1.72□□□□□ -2.68
YNL058CP53947 snR87snR87 109 nt-1.74□□□□□ -2.69
YNL058CP53947 tC(GCA)QtC(GCA)Q 76 nt-1.74□□□□□ -2.69
YNL058CP53947 YBR126W-BYBR126W-B 144 nt-2.03□□□□□ -2.73
YNL058CP53947 YDR543CYDR543C 300 nt-2.5□□□□□ -2.81
YNL058CP53947 YOL166W-AYOL166W-A 156 nt-2.65□□□□□ -2.83
YNL058CP53947 YJL136W-AYJL136W-A 84 nt-3.47□□□□□ -2.96
YNL058CP53947 YJR162CYJR162C 351 nt-3.5□□□□□ -2.97
Retrieved 29 of 7,029 protein–RNA pairs in 3.2 ms