Protein–RNA interactions for Protein: P48016

ATH1, Vacuolar acid trehalase, yeastyeast

Predictions only

Length 1,211 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATH1P48016 snR128snR128 126 nt0.64□□□□□ -2.31
ATH1P48016 tA(UGC)QtA(UGC)Q 76 nt0.52□□□□□ -2.33
ATH1P48016 tC(GCA)QtC(GCA)Q 76 nt0.49□□□□□ -2.33
ATH1P48016 YOL013W-AYOL013W-A 192 nt0.49□□□□□ -2.33
ATH1P48016 YOR335W-AYOR335W-A 81 nt0.47□□□□□ -2.33
ATH1P48016 snR6snR6 112 nt0.46□□□□□ -2.34
ATH1P48016 RPL41BYDL133C-A 78 nt0.46□□□□□ -2.34
ATH1P48016 snR161snR161 161 nt0.46□□□□□ -2.34
ATH1P48016 snR58snR58 96 nt0.23□□□□□ -2.37
ATH1P48016 snR73snR73 106 nt0.21□□□□□ -2.38
ATH1P48016 URB1YKL014C 5295 nt0.03□□□□□ -2.4
ATH1P48016 CDC65tQ(CUG)M 72 nt0.03□□□□□ -2.4
ATH1P48016 YHL009W-BYHL009W-B 5409 nt-0.06□□□□□ -2.42
ATH1P48016 YMR315W-AYMR315W-A 108 nt-0.12□□□□□ -2.43
ATH1P48016 YOR309CYOR309C 381 nt-0.44□□□□□ -2.48
ATH1P48016 snR87snR87 109 nt-0.54□□□□□ -2.5
ATH1P48016 snR33snR33 183 nt-0.54□□□□□ -2.5
ATH1P48016 tP(UGG)QtP(UGG)Q 72 nt-0.57□□□□□ -2.5
ATH1P48016 tT(UGU)G1tT(UGU)G1 72 nt-0.59□□□□□ -2.5
ATH1P48016 tT(UGU)G2tT(UGU)G2 72 nt-0.59□□□□□ -2.5
ATH1P48016 tT(UGU)PtT(UGU)P 72 nt-0.59□□□□□ -2.5
ATH1P48016 YNR077CYNR077C 255 nt-0.63□□□□□ -2.51
ATH1P48016 YBR223W-AYBR223W-A 120 nt-0.94□□□□□ -2.56
ATH1P48016 tY(GUA)QtY(GUA)Q 84 nt-1.01□□□□□ -2.57
ATH1P48016 YBR126W-BYBR126W-B 144 nt-1.48□□□□□ -2.65
ATH1P48016 YOL166W-AYOL166W-A 156 nt-1.97□□□□□ -2.72
ATH1P48016 YDR543CYDR543C 300 nt-2.14□□□□□ -2.75
ATH1P48016 YJL136W-AYJL136W-A 84 nt-2.73□□□□□ -2.85
ATH1P48016 YJR162CYJR162C 351 nt-2.83□□□□□ -2.86
Retrieved 29 of 7,029 protein–RNA pairs in 6.6 ms