Protein–RNA interactions for Protein: P43574

GAT1, Transcriptional regulatory protein GAT1, yeastyeast

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GAT1P43574 snR40snR40 97 nt0.25□□□□□ -2.37
GAT1P43574 tA(UGC)QtA(UGC)Q 76 nt0.14□□□□□ -2.39
GAT1P43574 snR161snR161 161 nt0.06□□□□□ -2.4
GAT1P43574 YJL113WYJL113W 4647 nt-0.03□□□□□ -2.41
GAT1P43574 snR6snR6 112 nt-0.08□□□□□ -2.42
GAT1P43574 YOR335W-AYOR335W-A 81 nt-0.08□□□□□ -2.42
GAT1P43574 RPL41BYDL133C-A 78 nt-0.17□□□□□ -2.44
GAT1P43574 CDC65tQ(CUG)M 72 nt-0.2□□□□□ -2.44
GAT1P43574 snR73snR73 106 nt-0.22□□□□□ -2.44
GAT1P43574 YMR315W-AYMR315W-A 108 nt-0.28□□□□□ -2.45
GAT1P43574 URB1YKL014C 5295 nt-0.32□□□□□ -2.46
GAT1P43574 tC(GCA)QtC(GCA)Q 76 nt-0.35□□□□□ -2.47
GAT1P43574 YHL009W-BYHL009W-B 5409 nt-0.36□□□□□ -2.47
GAT1P43574 tT(UGU)G1tT(UGU)G1 72 nt-0.37□□□□□ -2.47
GAT1P43574 tT(UGU)G2tT(UGU)G2 72 nt-0.37□□□□□ -2.47
GAT1P43574 tT(UGU)PtT(UGU)P 72 nt-0.37□□□□□ -2.47
GAT1P43574 tP(UGG)QtP(UGG)Q 72 nt-0.41□□□□□ -2.48
GAT1P43574 snR33snR33 183 nt-0.41□□□□□ -2.48
GAT1P43574 snR58snR58 96 nt-0.43□□□□□ -2.48
GAT1P43574 YOR309CYOR309C 381 nt-0.46□□□□□ -2.48
GAT1P43574 YNR077CYNR077C 255 nt-0.55□□□□□ -2.5
GAT1P43574 YBR223W-AYBR223W-A 120 nt-0.55□□□□□ -2.5
GAT1P43574 snR87snR87 109 nt-0.69□□□□□ -2.52
GAT1P43574 tY(GUA)QtY(GUA)Q 84 nt-0.79□□□□□ -2.54
GAT1P43574 YBR126W-BYBR126W-B 144 nt-1.06□□□□□ -2.58
GAT1P43574 YDR543CYDR543C 300 nt-1.24□□□□□ -2.61
GAT1P43574 YOL166W-AYOL166W-A 156 nt-1.36□□□□□ -2.63
GAT1P43574 YJR162CYJR162C 351 nt-1.77□□□□□ -2.69
GAT1P43574 YJL136W-AYJL136W-A 84 nt-1.95□□□□□ -2.72
Retrieved 29 of 7,029 protein–RNA pairs in 4.3 ms