Protein–RNA interactions for Protein: P42839

VNX1, Low affinity vacuolar monovalent cation/H(+) antiporter, yeastyeast

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VNX1P42839 tT(AGU)BtT(AGU)B 73 nt0.63□□□□□ -2.31
VNX1P42839 tT(AGU)CtT(AGU)C 73 nt0.63□□□□□ -2.31
VNX1P42839 tT(AGU)DtT(AGU)D 73 nt0.63□□□□□ -2.31
VNX1P42839 tT(AGU)HtT(AGU)H 73 nt0.63□□□□□ -2.31
VNX1P42839 tT(AGU)I1tT(AGU)I1 73 nt0.63□□□□□ -2.31
VNX1P42839 tT(AGU)I2tT(AGU)I2 73 nt0.63□□□□□ -2.31
VNX1P42839 tT(AGU)JtT(AGU)J 73 nt0.63□□□□□ -2.31
VNX1P42839 tT(AGU)N1tT(AGU)N1 73 nt0.63□□□□□ -2.31
VNX1P42839 tT(AGU)N2tT(AGU)N2 73 nt0.63□□□□□ -2.31
VNX1P42839 tT(AGU)O1tT(AGU)O1 73 nt0.63□□□□□ -2.31
VNX1P42839 tT(AGU)O2tT(AGU)O2 73 nt0.63□□□□□ -2.31
VNX1P42839 CDC65tQ(CUG)M 72 nt0.56□□□□□ -2.32
VNX1P42839 YMR315W-AYMR315W-A 108 nt0.55□□□□□ -2.32
VNX1P42839 YOL013W-AYOL013W-A 192 nt0.46□□□□□ -2.34
VNX1P42839 YOR309CYOR309C 381 nt0.29□□□□□ -2.36
VNX1P42839 YHL009W-BYHL009W-B 5409 nt0.27□□□□□ -2.37
VNX1P42839 tP(UGG)QtP(UGG)Q 72 nt-0.08□□□□□ -2.42
VNX1P42839 snR33snR33 183 nt-0.31□□□□□ -2.46
VNX1P42839 tY(GUA)QtY(GUA)Q 84 nt-0.61□□□□□ -2.51
VNX1P42839 tT(UGU)G1tT(UGU)G1 72 nt-0.62□□□□□ -2.51
VNX1P42839 tT(UGU)G2tT(UGU)G2 72 nt-0.62□□□□□ -2.51
VNX1P42839 tT(UGU)PtT(UGU)P 72 nt-0.62□□□□□ -2.51
VNX1P42839 YNR077CYNR077C 255 nt-0.62□□□□□ -2.51
VNX1P42839 YBR223W-AYBR223W-A 120 nt-0.92□□□□□ -2.56
VNX1P42839 YJL136W-AYJL136W-A 84 nt-1.18□□□□□ -2.6
VNX1P42839 YBR126W-BYBR126W-B 144 nt-1.55□□□□□ -2.66
VNX1P42839 YOL166W-AYOL166W-A 156 nt-1.86□□□□□ -2.71
VNX1P42839 YDR543CYDR543C 300 nt-2.12□□□□□ -2.75
VNX1P42839 YJR162CYJR162C 351 nt-2.81□□□□□ -2.86
Retrieved 29 of 7,029 protein–RNA pairs in 6.7 ms