Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 UTP10YJL109C 5310 nt0.74□□□□□ -2.29
PTP3P40048 tC(GCA)QtC(GCA)Q 76 nt0.69□□□□□ -2.3
PTP3P40048 tA(UGC)QtA(UGC)Q 76 nt0.63□□□□□ -2.31
PTP3P40048 RPL41BYDL133C-A 78 nt0.61□□□□□ -2.31
PTP3P40048 YOL013W-AYOL013W-A 192 nt0.61□□□□□ -2.31
PTP3P40048 snR6snR6 112 nt0.6□□□□□ -2.31
PTP3P40048 YOR335W-AYOR335W-A 81 nt0.57□□□□□ -2.32
PTP3P40048 snR161snR161 161 nt0.54□□□□□ -2.32
PTP3P40048 snR58snR58 96 nt0.42□□□□□ -2.34
PTP3P40048 YHL009W-BYHL009W-B 5409 nt0.35□□□□□ -2.35
PTP3P40048 snR73snR73 106 nt0.3□□□□□ -2.36
PTP3P40048 URB1YKL014C 5295 nt0.14□□□□□ -2.39
PTP3P40048 CDC65tQ(CUG)M 72 nt0.08□□□□□ -2.4
PTP3P40048 YMR315W-AYMR315W-A 108 nt-0.12□□□□□ -2.43
PTP3P40048 YOR309CYOR309C 381 nt-0.49□□□□□ -2.49
PTP3P40048 YNR077CYNR077C 255 nt-0.54□□□□□ -2.5
PTP3P40048 snR87snR87 109 nt-0.55□□□□□ -2.5
PTP3P40048 snR33snR33 183 nt-0.55□□□□□ -2.5
PTP3P40048 tT(UGU)G1tT(UGU)G1 72 nt-0.6□□□□□ -2.51
PTP3P40048 tT(UGU)G2tT(UGU)G2 72 nt-0.6□□□□□ -2.51
PTP3P40048 tT(UGU)PtT(UGU)P 72 nt-0.6□□□□□ -2.51
PTP3P40048 tP(UGG)QtP(UGG)Q 72 nt-0.66□□□□□ -2.52
PTP3P40048 YBR223W-AYBR223W-A 120 nt-0.82□□□□□ -2.54
PTP3P40048 tY(GUA)QtY(GUA)Q 84 nt-1.05□□□□□ -2.58
PTP3P40048 YBR126W-BYBR126W-B 144 nt-1.68□□□□□ -2.68
PTP3P40048 YDR543CYDR543C 300 nt-1.85□□□□□ -2.71
PTP3P40048 YOL166W-AYOL166W-A 156 nt-1.95□□□□□ -2.72
PTP3P40048 YJL136W-AYJL136W-A 84 nt-2.7□□□□□ -2.84
PTP3P40048 YJR162CYJR162C 351 nt-2.77□□□□□ -2.85
Retrieved 29 of 7,029 protein–RNA pairs in 5.5 ms