Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 snR33snR33 183 nt-0.66□□□□□ -2.52
SSF1P38789 snR77snR77 88 nt-0.72□□□□□ -2.52
SSF1P38789 YLR149C-AYLR149C-A 87 nt-0.73□□□□□ -2.53
SSF1P38789 tT(UGU)G1tT(UGU)G1 72 nt-0.74□□□□□ -2.53
SSF1P38789 tT(UGU)G2tT(UGU)G2 72 nt-0.74□□□□□ -2.53
SSF1P38789 tT(UGU)PtT(UGU)P 72 nt-0.74□□□□□ -2.53
SSF1P38789 tV(UAC)QtV(UAC)Q 76 nt-0.74□□□□□ -2.53
SSF1P38789 tP(UGG)QtP(UGG)Q 72 nt-0.82□□□□□ -2.54
SSF1P38789 CDC65tQ(CUG)M 72 nt-0.93□□□□□ -2.56
SSF1P38789 YKL096C-BYKL096C-B 150 nt-1.01□□□□□ -2.57
SSF1P38789 YMR315W-AYMR315W-A 108 nt-1.03□□□□□ -2.57
SSF1P38789 YBR223W-AYBR223W-A 120 nt-1.09□□□□□ -2.58
SSF1P38789 tY(GUA)QtY(GUA)Q 84 nt-1.25□□□□□ -2.61
SSF1P38789 YNR077CYNR077C 255 nt-1.28□□□□□ -2.61
SSF1P38789 YOR309CYOR309C 381 nt-1.29□□□□□ -2.62
SSF1P38789 snR6snR6 112 nt-1.3□□□□□ -2.62
SSF1P38789 YOR335W-AYOR335W-A 81 nt-1.33□□□□□ -2.62
SSF1P38789 RPL41BYDL133C-A 78 nt-1.38□□□□□ -2.63
SSF1P38789 snR73snR73 106 nt-1.44□□□□□ -2.64
SSF1P38789 snR75snR75 89 nt-1.58□□□□□ -2.66
SSF1P38789 snR40snR40 97 nt-1.66□□□□□ -2.68
SSF1P38789 YBR126W-BYBR126W-B 144 nt-1.96□□□□□ -2.72
SSF1P38789 snR87snR87 109 nt-2.06□□□□□ -2.74
SSF1P38789 snR58snR58 96 nt-2.12□□□□□ -2.75
SSF1P38789 tC(GCA)QtC(GCA)Q 76 nt-2.31□□□□□ -2.78
SSF1P38789 YDR543CYDR543C 300 nt-2.49□□□□□ -2.81
SSF1P38789 YOL166W-AYOL166W-A 156 nt-2.69□□□□□ -2.84
SSF1P38789 YJL136W-AYJL136W-A 84 nt-3.32□□□□□ -2.94
SSF1P38789 YJR162CYJR162C 351 nt-3.48□□□□□ -2.97
Retrieved 29 of 7,029 protein–RNA pairs in 2.8 ms