Protein–RNA interactions for Protein: P17255

VMA1, V-type proton ATPase catalytic subunit A, yeastyeast

Known RBP Predictions only

Length 1,071 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA1P17255 tT(AGU)O2tT(AGU)O2 73 nt0.76□□□□□ -2.29
VMA1P17255 snR128snR128 126 nt0.75□□□□□ -2.29
VMA1P17255 YOR335W-AYOR335W-A 81 nt0.71□□□□□ -2.3
VMA1P17255 UTP10YJL109C 5310 nt0.69□□□□□ -2.3
VMA1P17255 snR6snR6 112 nt0.65□□□□□ -2.31
VMA1P17255 snR161snR161 161 nt0.63□□□□□ -2.31
VMA1P17255 snR58snR58 96 nt0.6□□□□□ -2.31
VMA1P17255 tA(UGC)QtA(UGC)Q 76 nt0.59□□□□□ -2.31
VMA1P17255 YOL013W-AYOL013W-A 192 nt0.47□□□□□ -2.33
VMA1P17255 snR73snR73 106 nt0.44□□□□□ -2.34
VMA1P17255 CDC65tQ(CUG)M 72 nt0.15□□□□□ -2.39
VMA1P17255 URB1YKL014C 5295 nt0.13□□□□□ -2.39
VMA1P17255 YMR315W-AYMR315W-A 108 nt0.08□□□□□ -2.4
VMA1P17255 YHL009W-BYHL009W-B 5409 nt-0.06□□□□□ -2.42
VMA1P17255 snR87snR87 109 nt-0.25□□□□□ -2.45
VMA1P17255 YOR309CYOR309C 381 nt-0.27□□□□□ -2.45
VMA1P17255 tP(UGG)QtP(UGG)Q 72 nt-0.45□□□□□ -2.48
VMA1P17255 YNR077CYNR077C 255 nt-0.53□□□□□ -2.49
VMA1P17255 snR33snR33 183 nt-0.53□□□□□ -2.49
VMA1P17255 tT(UGU)G1tT(UGU)G1 72 nt-0.6□□□□□ -2.51
VMA1P17255 tT(UGU)G2tT(UGU)G2 72 nt-0.6□□□□□ -2.51
VMA1P17255 tT(UGU)PtT(UGU)P 72 nt-0.6□□□□□ -2.51
VMA1P17255 YBR223W-AYBR223W-A 120 nt-0.82□□□□□ -2.54
VMA1P17255 tY(GUA)QtY(GUA)Q 84 nt-1.02□□□□□ -2.57
VMA1P17255 YBR126W-BYBR126W-B 144 nt-1.56□□□□□ -2.66
VMA1P17255 YOL166W-AYOL166W-A 156 nt-1.67□□□□□ -2.68
VMA1P17255 YDR543CYDR543C 300 nt-1.84□□□□□ -2.7
VMA1P17255 YJL136W-AYJL136W-A 84 nt-2.31□□□□□ -2.78
VMA1P17255 YJR162CYJR162C 351 nt-2.83□□□□□ -2.86
Retrieved 29 of 7,029 protein–RNA pairs in 9.9 ms