Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 RPL21-206ENST00000466550 756 ntTSL 212.51□□□□□ -0.411e-323■■■□□ 14.6
DKC1O60832 RPL21-202ENST00000311549 815 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.561e-323■■■□□ 14.6
DKC1O60832 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.611e-323■■■□□ 14.6
DKC1O60832 RPL21-204ENST00000326092 641 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.641e-323■■■□□ 14.6
DKC1O60832 RPL21-205ENST00000461690 681 ntTSL 53.99□□□□□ -1.771e-323■■■□□ 14.6
DKC1O60832 RPL21-208ENST00000483765 453 ntTSL 33.86□□□□□ -1.791e-323■■■□□ 14.6
DKC1O60832 RPL21-209ENST00000485756 675 ntTSL 23.47□□□□□ -1.851e-323■■■□□ 14.6
DKC1O60832 RPL21-210ENST00000493317 438 ntTSL 22.2□□□□□ -2.061e-323■■■□□ 14.6
DKC1O60832 RPL4-207ENST00000564647 1110 ntTSL 26.32□□□□□ -1.43e-22■■■□□ 14.6
DKC1O60832 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.394e-7■■■□□ 14.6
DKC1O60832 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.234e-7■■■□□ 14.6
DKC1O60832 METTL12-202ENST00000529868 2870 ntTSL 1 (best)16.35■□□□□ 0.211e-323■■□□□ 14.5
DKC1O60832 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.031e-323■■□□□ 14.5
DKC1O60832 METTL12-201ENST00000398922 1368 ntTSL 414.47□□□□□ -0.091e-323■■□□□ 14.5
DKC1O60832 METTL12-204ENST00000594728 376 nt7.18□□□□□ -1.261e-323■■□□□ 14.5
DKC1O60832 MIR4435-2HG-212ENST00000444301 666 ntTSL 3 BASIC11.03□□□□□ -0.642e-8■■□□□ 14.5
DKC1O60832 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC8.87□□□□□ -0.992e-8■■□□□ 14.5
DKC1O60832 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC8.38□□□□□ -1.072e-8■■□□□ 14.5
DKC1O60832 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.89□□□□□ -1.152e-8■■□□□ 14.5
DKC1O60832 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.8□□□□□ -1.322e-8■■□□□ 14.5
DKC1O60832 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.71□□□□□ -1.662e-8■■□□□ 14.5
DKC1O60832 ACADM-211ENST00000528016 546 ntTSL 420.28■□□□□ 0.841e-36■■□□□ 14.5
DKC1O60832 SNORD45C-201ENST00000383893 79 ntBASIC-3.61□□□□□ -2.991e-36■■□□□ 14.5
DKC1O60832 SNORA57-201ENST00000383870 149 ntBASIC14.46□□□□□ -0.091e-323■■□□□ 14.5
DKC1O60832 SNORA27-201ENST00000384323 126 ntBASIC0.53□□□□□ -2.321e-323■■□□□ 14.4
DKC1O60832 HLA-C-208ENST00000487245 1880 nt28.25■■■□□ 2.115e-8■■□□□ 14.4
DKC1O60832 HLA-C-202ENST00000376237 1538 nt25.7■■□□□ 1.75e-8■■□□□ 14.4
DKC1O60832 G3BP1-207ENST00000520006 754 ntTSL 524.21■■□□□ 1.473e-6■■□□□ 14.4
DKC1O60832 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.45e-8■■□□□ 14.4
DKC1O60832 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.37■■□□□ 1.335e-8■■□□□ 14.4
DKC1O60832 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.845e-8■■□□□ 14.4
DKC1O60832 G3BP1-212ENST00000522761 1763 ntTSL 219.19■□□□□ 0.663e-6■■□□□ 14.4
DKC1O60832 HLA-C-205ENST00000466892 754 nt18.38■□□□□ 0.535e-8■■□□□ 14.4
DKC1O60832 G3BP1-209ENST00000520578 530 ntTSL 317.17■□□□□ 0.343e-6■■□□□ 14.4
DKC1O60832 G3BP1-213ENST00000523519 535 ntTSL 416.85■□□□□ 0.293e-6■■□□□ 14.4
DKC1O60832 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.245e-8■■□□□ 14.4
DKC1O60832 G3BP1-208ENST00000520177 2700 ntTSL 1 (best)15.42■□□□□ 0.063e-6■■□□□ 14.4
DKC1O60832 SLC38A10-207ENST00000542075 2903 ntTSL 215.24■□□□□ 0.035e-8■■□□□ 14.4
DKC1O60832 HLA-C-210ENST00000640219 976 ntBASIC15.05■□□□□ -05e-8■■□□□ 14.4
DKC1O60832 G3BP1-211ENST00000522666 783 ntTSL 313.05□□□□□ -0.323e-6■■□□□ 14.4
DKC1O60832 G3BP1-203ENST00000507878 577 ntTSL 413.03□□□□□ -0.323e-6■■□□□ 14.4
DKC1O60832 G3BP1-204ENST00000517947 558 ntTSL 413.03□□□□□ -0.323e-6■■□□□ 14.4
DKC1O60832 G3BP1-210ENST00000522367 580 ntTSL 313.03□□□□□ -0.323e-6■■□□□ 14.4
DKC1O60832 HLA-C-206ENST00000470363 1279 nt12.82□□□□□ -0.365e-8■■□□□ 14.4
DKC1O60832 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.383e-6■■□□□ 14.4
DKC1O60832 G3BP1-201ENST00000356245 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.383e-6■■□□□ 14.4
DKC1O60832 G3BP1-206ENST00000519832 1173 ntTSL 1 (best)11.33□□□□□ -0.63e-6■■□□□ 14.4
DKC1O60832 THBS1-206ENST00000497720 527 ntTSL 210.1□□□□□ -0.793e-6■■□□□ 14.4
DKC1O60832 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.393e-6■■□□□ 14.4
DKC1O60832 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.28□□□□□ -2.453e-6■■□□□ 14.4
DKC1O60832 SNORD4A-201ENST00000459174 72 ntBASIC-0.41□□□□□ -2.481e-29■■□□□ 14.3
DKC1O60832 R3HDM2-208ENST00000448732 195 ntTSL 1 (best)26.07■■□□□ 1.767e-8■■□□□ 14.3
DKC1O60832 BCAR1-216ENST00000564170 552 ntTSL 424.06■■□□□ 1.447e-8■■□□□ 14.3
DKC1O60832 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.297e-8■■□□□ 14.3
DKC1O60832 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.27e-8■■□□□ 14.3
DKC1O60832 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.037e-8■■□□□ 14.3
DKC1O60832 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC14.71□□□□□ -0.057e-8■■□□□ 14.3
DKC1O60832 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC14.03□□□□□ -0.167e-8■■□□□ 14.3
DKC1O60832 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC13.82□□□□□ -0.27e-8■■□□□ 14.3
DKC1O60832 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.237e-8■■□□□ 14.3
DKC1O60832 BMF-205ENST00000558057 450 ntTSL 313.44□□□□□ -0.267e-8■■□□□ 14.3
DKC1O60832 ZMYM2-209ENST00000494061 1063 ntTSL 210.59□□□□□ -0.717e-8■■□□□ 14.3
DKC1O60832 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.727e-8■■□□□ 14.3
DKC1O60832 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.037e-8■■□□□ 14.3
DKC1O60832 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.087e-8■■□□□ 14.3
DKC1O60832 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.197e-8■■□□□ 14.3
DKC1O60832 ZMYM2-205ENST00000382883 5445 ntTSL 54.52□□□□□ -1.697e-8■■□□□ 14.3
DKC1O60832 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.917e-8■■□□□ 14.3
DKC1O60832 RERE-211ENST00000469251 355 ntTSL 33.05□□□□□ -1.927e-8■■□□□ 14.3
DKC1O60832 ZMYM2-201ENST00000382870 3456 ntTSL 1 (best)2.23□□□□□ -2.057e-8■■□□□ 14.3
DKC1O60832 IGF2R-203ENST00000475584 597 ntTSL 317.12■□□□□ 0.335e-13■■□□□ 14.3
DKC1O60832 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.364e-7■■□□□ 14.2
DKC1O60832 BUB1-210ENST00000478175 759 ntTSL 54.75□□□□□ -1.654e-7■■□□□ 14.2
DKC1O60832 ASCC2-206ENST00000449900 580 ntTSL 322.54■■□□□ 1.23e-9■■□□□ 14.2
DKC1O60832 ASCC2-210ENST00000460313 568 ntTSL 222.2■■□□□ 1.143e-9■■□□□ 14.2
DKC1O60832 ASCC2-208ENST00000454854 469 ntTSL 420.87■□□□□ 0.933e-9■■□□□ 14.2
DKC1O60832 ASCC2-221ENST00000495681 536 ntTSL 520.87■□□□□ 0.933e-9■■□□□ 14.2
DKC1O60832 ASCC2-222ENST00000495967 554 ntTSL 420.87■□□□□ 0.933e-9■■□□□ 14.2
DKC1O60832 ASCC2-207ENST00000453160 529 ntTSL 416.99■□□□□ 0.313e-9■■□□□ 14.2
DKC1O60832 ASCC2-211ENST00000462454 491 ntTSL 312.11□□□□□ -0.473e-9■■□□□ 14.2
DKC1O60832 ASCC2-205ENST00000431535 873 ntTSL 510.44□□□□□ -0.743e-9■■□□□ 14.2
DKC1O60832 ASCC2-204ENST00000412689 742 ntTSL 310.16□□□□□ -0.783e-9■■□□□ 14.2
DKC1O60832 ASCC2-214ENST00000465667 876 ntTSL 310.16□□□□□ -0.783e-9■■□□□ 14.2
DKC1O60832 PHC2-212ENST00000493483 760 ntTSL 326.68■■□□□ 1.862e-12■■□□□ 14.2
DKC1O60832 PHC2-206ENST00000467894 1466 ntTSL 525.88■■□□□ 1.732e-12■■□□□ 14.2
DKC1O60832 PHC2-210ENST00000485928 2548 ntTSL 224.02■■□□□ 1.442e-12■■□□□ 14.2
DKC1O60832 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.42e-12■■□□□ 14.2
DKC1O60832 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.292e-12■■□□□ 14.2
DKC1O60832 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC12.6□□□□□ -0.392e-12■■□□□ 14.2
DKC1O60832 PHC2-204ENST00000431992 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.52e-12■■□□□ 14.2
DKC1O60832 PHC2-211ENST00000486897 547 ntTSL 511.55□□□□□ -0.562e-12■■□□□ 14.2
DKC1O60832 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.732e-31■■□□□ 14.2
DKC1O60832 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.772e-31■■□□□ 14.2
DKC1O60832 ATXN1-204ENST00000473388 1569 ntTSL 1 (best)8.22□□□□□ -1.092e-31■■□□□ 14.2
DKC1O60832 ATXN1-205ENST00000479680 568 ntTSL 47.94□□□□□ -1.142e-31■■□□□ 14.2
DKC1O60832 ATXN1-210ENST00000498374 1648 ntTSL 1 (best)7.87□□□□□ -1.152e-31■■□□□ 14.2
DKC1O60832 ATXN1-207ENST00000483954 744 ntTSL 35.59□□□□□ -1.512e-31■■□□□ 14.2
DKC1O60832 ATXN1-208ENST00000492857 647 ntTSL 45.23□□□□□ -1.572e-31■■□□□ 14.2
DKC1O60832 ATXN1-203ENST00000467008 3362 ntTSL 1 (best)3.53□□□□□ -1.842e-31■■□□□ 14.2
DKC1O60832 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.191e-323■■□□□ 14.2
Retrieved 100 of 8,567 protein–RNA pairs in 137.1 ms