Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm25414-201ENSMUST00000101814 107 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm24430-201ENSMUST00000104077 104 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Mir1192-201ENSMUST00000116976 121 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm14943-201ENSMUST00000118056 546 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm15659-201ENSMUST00000118881 341 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm15113-201ENSMUST00000119280 836 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm25945-201ENSMUST00000122484 135 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm22563-201ENSMUST00000157333 269 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm23538-201ENSMUST00000157535 101 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm26173-201ENSMUST00000158416 136 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Mir6541-201ENSMUST00000183649 110 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm29597-201ENSMUST00000188035 308 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm9696-202ENSMUST00000191541 830 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm37007-201ENSMUST00000194234 319 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm18982-201ENSMUST00000198118 529 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm42857-201ENSMUST00000200823 339 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm45173-201ENSMUST00000206819 305 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm45048-201ENSMUST00000207058 429 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.65□□□□□ -1.98
Trim3Q9R1R2 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Trim3Q9R1R2 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.65□□□□□ -1.98
Trim3Q9R1R2 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm23747-201ENSMUST00000104228 131 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm23911-201ENSMUST00000104596 134 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm14594-201ENSMUST00000118052 537 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm14590-201ENSMUST00000118934 537 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm11438-201ENSMUST00000121582 189 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm23391-201ENSMUST00000157579 104 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm24240-201ENSMUST00000157785 135 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm17119-201ENSMUST00000163943 280 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm25451-201ENSMUST00000177832 121 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm24100-201ENSMUST00000178592 79 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm26189-201ENSMUST00000179879 107 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm14596-201ENSMUST00000180268 537 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm14595-201ENSMUST00000180335 537 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm44393-201ENSMUST00000197418 138 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm43114-201ENSMUST00000198298 343 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.65□□□□□ -1.99
Trim3Q9R1R2 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm7984-201ENSMUST00000060640 538 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Trim3Q9R1R2 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Mir542-201ENSMUST00000102186 85 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm25466-201ENSMUST00000103995 132 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm12102-201ENSMUST00000118251 604 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm11357-201ENSMUST00000119758 954 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm14841-201ENSMUST00000121067 758 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm14694-201ENSMUST00000121856 282 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm15466-201ENSMUST00000122299 333 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm26088-201ENSMUST00000157896 131 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm23409-201ENSMUST00000158516 237 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm17187-201ENSMUST00000164622 410 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm22584-201ENSMUST00000177935 92 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm23568-201ENSMUST00000177960 92 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm24829-201ENSMUST00000179245 92 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Mir6386-201ENSMUST00000183558 104 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm27470-201ENSMUST00000184070 210 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm27869-201ENSMUST00000184327 122 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm27608-201ENSMUST00000184822 162 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm6801-201ENSMUST00000190697 339 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm35212-201ENSMUST00000196672 606 ntBASIC2.64□□□□□ -1.99
Trim3Q9R1R2 Gm42818-201ENSMUST00000198869 987 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 171.4 ms