Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm14657-201ENSMUST00000117461 302 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm23169-201ENSMUST00000157157 112 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm23592-201ENSMUST00000157859 117 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm24225-201ENSMUST00000158825 98 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm26430-201ENSMUST00000178054 107 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm28418-201ENSMUST00000186179 423 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm29490-201ENSMUST00000190923 342 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm34091-201ENSMUST00000200875 604 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm39147-201ENSMUST00000211376 465 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 AC161254.1-201ENSMUST00000220310 3842 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 CT030187.1-201ENSMUST00000220605 252 ntBASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Brf1Q8CFK2 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gm24581-201ENSMUST00000103962 133 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gm12149-201ENSMUST00000117511 654 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gm13085-201ENSMUST00000118356 171 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gm12118-201ENSMUST00000119766 532 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gm13692-201ENSMUST00000120774 371 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gm23755-201ENSMUST00000157578 343 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Mir1934-201ENSMUST00000158127 83 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gm27013-201ENSMUST00000182441 1024 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gm27640-201ENSMUST00000184580 147 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gm42850-201ENSMUST00000202094 201 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Gm45245-201ENSMUST00000210082 376 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.17□□□□□ -1.74
Brf1Q8CFK2 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Brf1Q8CFK2 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm26387-201ENSMUST00000104238 132 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm25727-201ENSMUST00000104522 131 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm24835-201ENSMUST00000116777 111 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm14823-201ENSMUST00000117698 238 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm14541-201ENSMUST00000118985 157 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm25624-201ENSMUST00000157222 275 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm25982-201ENSMUST00000157920 101 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm26195-201ENSMUST00000175035 101 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm26092-201ENSMUST00000179798 97 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Mir669a-1-201ENSMUST00000180238 97 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm27952-201ENSMUST00000184748 105 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm28860-201ENSMUST00000188103 313 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm32340-201ENSMUST00000192883 259 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm37743-201ENSMUST00000194645 376 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm38019-201ENSMUST00000195133 380 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm44373-201ENSMUST00000196112 169 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm43406-201ENSMUST00000200356 334 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm2189-201ENSMUST00000201419 429 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm25475-201ENSMUST00000082825 180 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Snord35b-201ENSMUST00000082833 87 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Brf1Q8CFK2 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.16□□□□□ -1.74
Brf1Q8CFK2 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
Brf1Q8CFK2 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.15□□□□□ -1.74
Brf1Q8CFK2 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Brf1Q8CFK2 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 138.4 ms