Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm28623-201ENSMUST00000187219 192 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm28474-201ENSMUST00000188501 315 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm44399-201ENSMUST00000205043 226 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm44519-201ENSMUST00000206486 122 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm45226-201ENSMUST00000206602 288 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm46146-201ENSMUST00000217483 346 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm23506-201ENSMUST00000083077 107 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm25560-201ENSMUST00000104606 176 ntBASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Mir466f-3-201ENSMUST00000104788 94 ntBASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm8858-201ENSMUST00000118259 342 ntBASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm14159-201ENSMUST00000119832 451 ntBASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm23212-201ENSMUST00000122718 60 ntBASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm24627-201ENSMUST00000122764 138 ntBASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Mir6353-201ENSMUST00000183596 113 ntBASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm29550-201ENSMUST00000185543 285 ntBASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Trim58Q5NCC9 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm24120-201ENSMUST00000103978 129 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Mir466f-2-201ENSMUST00000104805 94 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm12814-201ENSMUST00000117091 846 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm25153-201ENSMUST00000157118 156 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm24210-201ENSMUST00000158263 133 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm20415-201ENSMUST00000172877 423 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm24520-201ENSMUST00000179510 110 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm43043-201ENSMUST00000196579 412 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm43114-201ENSMUST00000198298 343 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim58Q5NCC9 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm12509-201ENSMUST00000118033 609 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm14359-201ENSMUST00000118883 424 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm14566-201ENSMUST00000118915 321 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm9498-201ENSMUST00000140849 291 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm22516-201ENSMUST00000158266 124 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm23352-201ENSMUST00000158428 64 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm8676-201ENSMUST00000184206 637 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm29045-201ENSMUST00000187278 698 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm29553-201ENSMUST00000189692 279 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm38329-201ENSMUST00000193473 427 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim58Q5NCC9 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm43232-201ENSMUST00000201346 364 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim58Q5NCC9 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 AC116726.2-201ENSMUST00000217629 986 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.09□□□□□ -1.91
Trim58Q5NCC9 AC167192.1-201ENSMUST00000225908 139 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 219.3 ms