Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm29134-201ENSMUST00000186579 126 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Gm28241-201ENSMUST00000190916 235 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Gm2189-201ENSMUST00000201419 429 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Gm45245-201ENSMUST00000210082 376 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Gm7240-201ENSMUST00000220769 664 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 AC192333.1-201ENSMUST00000224573 376 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Gm26228-201ENSMUST00000082512 107 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Gm25080-201ENSMUST00000082526 107 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Gm23515-201ENSMUST00000082829 107 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Gm24037-201ENSMUST00000082871 180 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Mir181a-1-201ENSMUST00000083631 87 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Gm25518-201ENSMUST00000083864 107 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Gm10212-201ENSMUST00000087884 324 ntBASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Pcdh9F8VPK8 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm17119-201ENSMUST00000163943 280 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Mir6907-201ENSMUST00000183764 71 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Mir6951-201ENSMUST00000183910 75 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm21673-201ENSMUST00000186640 436 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm21135-201ENSMUST00000189023 436 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm38329-201ENSMUST00000193473 427 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm18433-202ENSMUST00000195682 196 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm19620-201ENSMUST00000195972 434 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm45438-201ENSMUST00000210242 564 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm23932-201ENSMUST00000082914 107 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm23136-201ENSMUST00000083425 99 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.39□□□□□ -1.87
Pcdh9F8VPK8 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm24889-201ENSMUST00000104388 132 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm25727-201ENSMUST00000104522 131 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm13873-201ENSMUST00000119208 427 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm25909-201ENSMUST00000157619 121 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm24853-201ENSMUST00000158026 121 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Mir1934-201ENSMUST00000158127 83 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm20794-201ENSMUST00000177626 628 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Mir6413-201ENSMUST00000184049 108 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm28002-201ENSMUST00000184832 100 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm38050-201ENSMUST00000191904 238 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm19777-201ENSMUST00000191940 358 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm45402-201ENSMUST00000211796 223 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Pcdh9F8VPK8 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Pcdh9F8VPK8 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms