Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm25476-201ENSMUST00000175125 185 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Mir5123-201ENSMUST00000177794 83 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Mir7k-201ENSMUST00000184115 110 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm27700-201ENSMUST00000185003 81 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm28647-201ENSMUST00000188416 197 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm28745-201ENSMUST00000190069 305 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm1833-201ENSMUST00000191608 682 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm43026-201ENSMUST00000202972 325 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm7946-201ENSMUST00000203326 958 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm7422-201ENSMUST00000220115 640 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm5471-201ENSMUST00000072732 337 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm23847-201ENSMUST00000083829 110 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm6587-201ENSMUST00000120219 613 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm16533-201ENSMUST00000140035 228 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm6265-201ENSMUST00000149263 231 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm23668-201ENSMUST00000157465 111 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm22416-201ENSMUST00000158590 88 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm25119-201ENSMUST00000158815 88 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm25194-201ENSMUST00000177987 79 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm24897-201ENSMUST00000179033 107 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm21893-201ENSMUST00000179119 397 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Mir6993-201ENSMUST00000184912 65 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm28802-201ENSMUST00000188624 944 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm43652-201ENSMUST00000196219 675 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm44387-201ENSMUST00000196298 145 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm24350-202ENSMUST00000198309 132 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm17991-201ENSMUST00000208139 297 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm30534-201ENSMUST00000217928 207 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm46994-201ENSMUST00000221523 219 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm5955-201ENSMUST00000222712 219 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Snora23-201ENSMUST00000082517 184 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm24921-201ENSMUST00000083024 107 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trim3Q9R1R2 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.68□□□□□ -1.98
Trim3Q9R1R2 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trim3Q9R1R2 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm22091-201ENSMUST00000116908 127 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm12042-201ENSMUST00000120479 301 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm12155-201ENSMUST00000121267 160 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm12639-201ENSMUST00000121400 493 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm13424-201ENSMUST00000122301 354 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm23118-201ENSMUST00000122657 187 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm23325-201ENSMUST00000157422 129 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm24552-201ENSMUST00000158646 103 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Mir5129-201ENSMUST00000174938 78 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm18417-201ENSMUST00000176564 648 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm25360-201ENSMUST00000178786 191 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm43171-201ENSMUST00000199882 291 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm44449-201ENSMUST00000203610 153 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm44688-201ENSMUST00000209083 537 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.67□□□□□ -1.98
Trim3Q9R1R2 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trim3Q9R1R2 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.66□□□□□ -1.98
Trim3Q9R1R2 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 204.2 ms